Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1913 ATGGAGGGCGAGAGTGCGAAGAAGAGTAGCGAAAGCAGTGTGAACGGTCAACCCCGTGTGGGTTTACTATACGATAGGAGAATGTGCAAGCACCACACGCCGAACAACGAGGACCACGTCGAGACTCCTAATCGCATTAGGTCAACTTGGAACCACCTCGAGAGCGCCGGCATTCCTCAACGATGCCTGATTCTGGAGGCCAAGAAAGCTGAAGACAAACATCTGCGGTTAGTGCATTCCAGAGTTCATGTAAATCTGATTAAGAACATTAGCTCCAAGCAATTCAGTTCGCGGAGACCCGAGATTGCCTCCAAATTGAATTCCATATACTTTAACGAAGGTTCATCTGAAGCTGCGTACCTTGCTGCTGGCTCTGCTGTAGTGGTTGTTGAAAAAGTGGCAAGCGGGGAATTGGATTCGGCTGTTGCCATTGTTAGGCCTCCAGGTCATCATGCAGAACAGAATGAAGCTATGGGGTTTTGTCTCTTCAACAATGTGGCAGTTGCTGCAAGATATCTCTTAGACGAAAGACCTGATTTAGGTGTGAAGAAAATTTTAATTGTTGATTGGGATGTCCATCATGGAAATGGTACTCAAAAGATGTTCTGGAATGACTCTCGAGTTTTATTCTTCTCCGTTCACAGGCATGAGTTTGGGAGTTTTTATCCTGCTAATGACGATGGATTTTATACTAAGGTGGGAGAAGGAGAAGGTGCTGGATATAATATAAATGTCCCCTGGGAGAATGGGAGATGTGGTGATGCAGATTACTTTGCAGTGTGGGACCACATTTTGCTTCCTGTAACCAAAGAATTTAATCCAGACATAATTATAGTTTCCGCGGGATTTGATGCAGCTGTTGGTGACCCTTTGGGAGGATGTCGTGTCACACCATTTGGTTATTCTGTTCTGTTGAAAGAGTTGATGAATTTTGCTGAAGGTAGGATTGTATTGATTTTAGAAGGGGGATATAATCTTGATTCCATTGCAAGATCAATGCATGCTTGCTTGGAAGTTTTGCTAAAAGACAAGCCTGTTATCAGATCCTTAGAGGCCTATCCATTTCAGTCTACATGGAATGTAATTCAAGCGGTTCGCCAGACGTTAAGTCCCTTTTGGCCTACACTTGCATCTGAACTACCACAAGAGTTAGTCTCACAAATAGCACCCCCTCCGCATACTCTAATTTCGAGCTCTGACTCCGAAGATGAGGATGATAAGGGTGCAGCAAGTTTAGAAAATGTTGGAGAACTTCTTGAGGATGTCATAAAACCACTTTCCAAACTGAAAGTTGATGCTGATGAAGAGATTCATGTTTCTAGTACTTGGCGATCTGAATTGTCAAATGTTTATATATGGTATGCCTCGTATGGATCAAATATGTGGAAAGCAAGATTTAATTGCTACCTAGAAGGTGGACAGGTGGATGGTATGGTGAAGCAGTGTTCTGGTTCAGTGAACAGAACTCTGCCAAAGGAGATCATGTGGAAGACTTTCCCTTGTGATATATTCTTTGGTCGTGATTCATCGTATTCGTGGGGTCTGGGAGGTGTTGCATTTCTTAATCCTGAAAAAATAATTGAAGGCAAGACCCACATGTGCATGTACAAAATTTCGCTAGAGCAGTTCAATGATATTTTATTTCAGGAAAACATTTTAAGCCTTGATGCGGGCTCTCCTTTATTTGATATAACCACCTTGAATGCTGTCTCTGACAAGGAGTTCAACTTCCTGGAGGTTGTCAAGGGTGCTTGGTATGGTAATGTTGTGTACTTAGGAAAGGAGCAGGATATTCCTGTAATTACCATGACGTCTTCGCTTCTTGATATTGAACGTTTCAAATCTGGGAAGCTACCATTACGTGCTCCTAATAAAGCATATGCCAACTCCTTAATTAAAGGGTTGGTAGAGGGAGAACAACTTTCGGAGGCGGAAGCCATTGCTTACATAGAAGGTGCTGCTAAATCTTTGTGA 1974 0.4291 MEGESAKKSSESSVNGQPRVGLLYDRRMCKHHTPNNEDHVETPNRIRSTWNHLESAGIPQRCLILEAKKAEDKHLRLVHSRVHVNLIKNISSKQFSSRRPEIASKLNSIYFNEGSSEAAYLAAGSAVVVVEKVASGELDSAVAIVRPPGHHAEQNEAMGFCLFNNVAVAARYLLDERPDLGVKKILIVDWDVHHGNGTQKMFWNDSRVLFFSVHRHEFGSFYPANDDGFYTKVGEGEGAGYNINVPWENGRCGDADYFAVWDHILLPVTKEFNPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKELMNFAEGRIVLILEGGYNLDSIARSMHACLEVLLKDKPVIRSLEAYPFQSTWNVIQAVRQTLSPFWPTLASELPQELVSQIAPPPHTLISSSDSEDEDDKGAASLENVGELLEDVIKPLSKLKVDADEEIHVSSTWRSELSNVYIWYASYGSNMWKARFNCYLEGGQVDGMVKQCSGSVNRTLPKEIMWKTFPCDIFFGRDSSYSWGLGGVAFLNPEKIIEGKTHMCMYKISLEQFNDILFQENILSLDAGSPLFDITTLNAVSDKEFNFLEVVKGAWYGNVVYLGKEQDIPVITMTSSLLDIERFKSGKLPLRAPNKAYANSLIKGLVEGEQLSEAEAIAYIEGAAKSL* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1913 657 Gene3D - 442 655 - -
Pvu3g1913 657 SUPERFAMILY Arginase/deacetylase 18 374 IPR023696 -
Pvu3g1913 657 Gene3D Histone deacetylase domain 13 389 IPR037138 -
Pvu3g1913 657 PRINTS Histone deacetylase superfamily signature 147 170 IPR000286 -
Pvu3g1913 657 PRINTS Histone deacetylase superfamily signature 274 284 IPR000286 -
Pvu3g1913 657 PANTHER HISTONE DEACETYLASE 7 612 - -
Pvu3g1913 657 Pfam Histone deacetylase domain 39 339 IPR023801 -
Pvu3g1913 657 PANTHER BNAA09G05590D PROTEIN 7 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1913 Pvu-Chr3 39711514 39716954 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1913 K11406 - gmx:100788831 1151.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1913 3 39711514 39716954 Pvu3g1913 3 39711514 39716954 ECH
Pvu3g1913 3 39711514 39716954 Pvu9g1932 9 27664103 27665964 PCT