Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1904 ATGGCGTCCTTATCCAGTTTTGCTCCTCTTGTGTTTCTTCTGCTTGTTATTGGGTGCACTGCAAGGCCTTTTTATCCTCTTCCCAGCAAAGGTGATGGGGGAAGTAGGAAGCCCCTACAGACTCTTCGCCCATACAACATTGCACATCGCGGTTCAAATGGAGAGATTCCTGAAGCAACTCATCCTGCATATACGAGAGCTATTGAAGAAGGGGCAGACTTCATTGAAACTGATATCTTATCATCCAAAGATGGTGTTCTTATATGTTTTCATGATGCTACCCTTGATAATACTACTGACATTGCAAATTACGCAGAGTTTGCTAATCGTAAAAGAACGTATGAAGTCCAAGGGGAAAACATCACTGGGTTCTTTACTGTTGATTTCACATTAAAGGAGTTAAAGTCATTGAGGGTGAGACAGAGGTATACATACAGGGATCAACAGTTTAATGGAAAGTTTCAAATCATCACTTTTGAAGAGTTCATTACCATAGCACTGCAGGCACCCAGAGTTGTTGGAATATATCCAGAGATAAAATATCCAGTATATATCAATCAACATGTTAAATGGTCAGATGGAAAAATATTTGAGGACAAGTTTGTGGACACACTTCAGAAGTATGGGTTCAAGGGTTCCTACCTGTCAAAAAATTGGCTGAGACAACCTATATTCATTCAGTCATTTGCTCCAACTTCACTTGTGTATATAGCAAATAAAACGGACTTGCCCAAAATTCTGTTAATCGACGATATTGATATTCCAACGCAAGACACCAATCAGTCATACTGGGAGATTACATCTGATGAATACCTAAACTACATAAAGCAATATGTTGTAGGAATTGGACCTTGGAAAGACACGTTGGTACCTGTAGCAAAAAATTATATGCGAACTCCTACTGATCTTGTTTCCAGGGCACATGCTCATAATCTGCAGGTGCATCCATATACTTACCGAAATGAGAATTCTTTTTTGCACTTCAACTTTAGTCAAGATCCGTATATGGAGTATGATTACTGGATCAACAAGATAGGCATTGATGGTCTGTTTACGGACTTCACTGGTAGTCTTCATCATTTTCAGGAATGGACCTCTAAACATCAAGATGATGATAGTGACAACGATGATAACACTGCATCCAAACTGTTGCATAAAATTGCAATGTTGCTCGCCTCTTATAAATGA 1188 0.3914 MASLSSFAPLVFLLLVIGCTARPFYPLPSKGDGGSRKPLQTLRPYNIAHRGSNGEIPEATHPAYTRAIEEGADFIETDILSSKDGVLICFHDATLDNTTDIANYAEFANRKRTYEVQGENITGFFTVDFTLKELKSLRVRQRYTYRDQQFNGKFQIITFEEFITIALQAPRVVGIYPEIKYPVYINQHVKWSDGKIFEDKFVDTLQKYGFKGSYLSKNWLRQPIFIQSFAPTSLVYIANKTDLPKILLIDDIDIPTQDTNQSYWEITSDEYLNYIKQYVVGIGPWKDTLVPVAKNYMRTPTDLVSRAHAHNLQVHPYTYRNENSFLHFNFSQDPYMEYDYWINKIGIDGLFTDFTGSLHHFQEWTSKHQDDDSDNDDNTASKLLHKIAMLLASYK* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1904 395 Gene3D Phosphatidylinositol (PI) phosphodiesterase 43 361 IPR017946 GO:0006629|GO:0008081
Pvu3g1904 395 PANTHER OS01G0763600 PROTEIN 7 394 - -
Pvu3g1904 395 Pfam Glycerophosphoryl diester phosphodiesterase family 49 356 IPR030395 GO:0006629|GO:0008081
Pvu3g1904 395 CDD GDPD_ScGlpQ1_like 44 355 - -
Pvu3g1904 395 SUPERFAMILY PLC-like phosphodiesterases 44 359 IPR017946 GO:0006629|GO:0008081
Pvu3g1904 395 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 7 394 - -
Pvu3g1904 395 ProSiteProfiles GP-PDE domain profile. 44 362 IPR030395 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1904 Pvu-Chr3 39625087 39628392 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1904 4 394 Acyl Lipid Metabolism Gene Families AT1G74210 70.408 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1904 K01126 - gmx:100778145 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1904 3 39625087 39628392 Pvu3g1904 3 39625087 39628392 ECH