Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1894 ATGCAGAGTTTAGTTCGCAAAGTGGTGGAACACCACTACCATCGTCAACCCAAATCTCACAGTATCTTCCACACCTTCTCCTCTGTTCTCAAACCTTCCGAACCCCAACTGCATCAACGCAACCACATTCCCTCTTCCTTCCTCACTCACCACCCTCCTCACATTCACTCATGCCGCTCCTTTACCACCAAACTCTCCGCCTTTCTCTCCCAACCAACGATCTCACGCCGCTTCGCCTTCAGCTCTCTCCTCGGAGTCCGCGCTAGAAGCATCTCACTAGATCACAGGCAAATCCTTCGTTATTTTCGTCGACACAACTTCAATTTCAACTACAATCATGGATTCTCCCAGCGTTCCTGGAGATCATGGCTCCGTGGGCTAACATCTGATGGCGTGGTTTTGGGCTTGATTATAGCTAATGTTGCTATTTTTTTATTGTGGAGGATAGCAAATGAAAAGTTTATGATACAAAATTTTACCATCTCTTTGGACAGTATTAAGAGTGGACGTTTGCACACTTTGATTACCAATGCATTTAGTCACGTAGATACCTGGCATCTAGTTTCCAATATGATTGGACTCTACTTCTTTGGAATGAATGTTGGAAGAAATTTTGGACCGGAATTTCTGCTGAAGTTGTACCTTGCAGGGGCAGTTGTTGGCTCTGTTTTTTACTTAATGCATCAAACCTATAAAGCGCAAACATCAAAGGACTGGAGAGCTATGATTGTGTCAAAGGAATTAGCATTGGGGGCAAGTGGAGCGGTGAATGCTATTATGCTACTTGATATATTTCTCTTTCCAAAAGCAACCCTTTACCTTGACTTTTTTATACCAGTTCCCGCGATCTTGCTGGGTATCTTTATTATTGGGAAAGATATGCTCAGGATACTAGAGGGAGACAGTCAAATATCAGGATCTGTTCATTTGGGGGGAGCTGTTGTTGCAGCCGTGGCTTGGGCAGGTGTTCGGAAAGGAAGATTCTAA 987 0.4417 MQSLVRKVVEHHYHRQPKSHSIFHTFSSVLKPSEPQLHQRNHIPSSFLTHHPPHIHSCRSFTTKLSAFLSQPTISRRFAFSSLLGVRARSISLDHRQILRYFRRHNFNFNYNHGFSQRSWRSWLRGLTSDGVVLGLIIANVAIFLLWRIANEKFMIQNFTISLDSIKSGRLHTLITNAFSHVDTWHLVSNMIGLYFFGMNVGRNFGPEFLLKLYLAGAVVGSVFYLMHQTYKAQTSKDWRAMIVSKELALGASGAVNAIMLLDIFLFPKATLYLDFFIPVPAILLGIFIIGKDMLRILEGDSQISGSVHLGGAVVAAVAWAGVRKGRF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1894 328 SUPERFAMILY Rhomboid-like 132 325 IPR035952 -
Pvu3g1894 328 Pfam Rhomboid family 166 321 IPR022764 GO:0004252|GO:0016021
Pvu3g1894 328 PANTHER RHOMBOID PROTEASE 19 321 - -
Pvu3g1894 328 Gene3D - 129 321 IPR035952 -
Pvu3g1894 328 PANTHER RHOMBOID-LIKE PROTEIN 12, MITOCHONDRIAL 19 321 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1894 - - vra:106767388 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1894 3 39523355 39533560 Pvu3g1894 3 39523355 39533560 ECH