Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1886 ATGCGACGGCGGGCTGCCGATTTTCGGCGCCCGGTTCGACGGAGGTTTTCATATTGGATCTGGCTTCTCCTCGCCTTCTCCTCTATCCTAGCTCTCCTTCTCTTCCTTCTCCAACACAACCACCACCACCAAGATCCGCATCATTATCCCTTGCCGGAGAGAAATGCAAGAGTTGAACATTTTGCTAAGGAGAATTTGAATTTTACTCAAGAGATTTTAAGTGTAAAATCATTTTCACGACAGTTAGCAGAACAAATGATTCTAGCCAAAGCTTATGTGGTTATTGCCAAAGAACATAACAATCTTCACCTTGCCTGGCAGCTTAGCTCAAAGATCAGAAATTGCCAGCTTTTGCTTTCAAAAGCGGCCATCACTGGTGAGCCCATCACGTTGGAGGAAGCAGAGCCAATTATTAAAAGCCTTTCTCTTCTAATGTTTAAGGCACAAGATATCCATTATGACATTTCAACCACAATAGTAACCATGAAATCACATATTCAAGCTCTAGAAGAGCGAGTCAATGCAGCAATAGTTCAAAGCACCGTGTTTGGTCAAATAGCAGCTGAAGCAGTATCTAAGAGTCTTCATTGCCTAAATGTGAAACTCATGTCTGATTGGCTAAAGATACCATCTCTCCAGGAACTCTCAGATGAGAGGAAAAACTCCCCACGGCTTGTGGACAACAATCTATATCATTTCTGCATATTTTCAGATAATGTACTGGCAACATCTGTAGTTGTAAACTCAACTGTCTCCAATGCTGACCATCCAAAGCAATTGGTCTTTCACATTGTCACTAATGGAGTCAGTTATGGGGTAATGCTAGCATGGTTCCTACGTAATGACTTTAAAGGAGCCACCATAGAGATACAGAACATTGAGGAGTTTCATTGGTTGAATGCATCTTATTCTCCTCTTGTCAAGCAGCTTCTCAATCCTGATTCAAGAACCTTCTATTTTGGAGCATATCAAGATTTAAATGTTGAACCCAAAATGCGGAATGCCAAGTATCTGTCTTTATTGAATCATCTTCGGTTTTACATCCCTGAGATTTATCCGCAACTAGAGAAGGTTGTCTTCCTGGATGATGACCTTGTTGTCCAGAAGGATCTGACCCCACTTTTCTCCCTGGATTTGCATGGGAATGTTAATGGTGCTGTTGAAACTTGTCTCGAAGCCTTTCATCGATACTACAAGTATGTCAACTTCTCAAATTCGGTTATTAGCTCGAGATTCGATCCACAGGCATGTGCATGGGCATTTGGTATGAACATTTTTGATTTGGTTGCATGGAGGAAGGCAAATGTGACCACAAAATATCACTATTGGCAAGAACAAAATGCCGACGGGACACTCTGGAAGCTGGGGACACTTCCTCCTGCCCTTCTGTGTTTTTATGGTTTGACAGAGCCACTTGACAGAAGATGGCATGTTTTGGGATTGGGTTATGACCTAAATATTGACAATCGCCTCATTGAAAGTGCGGCAGTCATTCACTTCAACGGGAACATGAAGCCGTGGTTGAAGTTAGCCATAGGCAGATACAAGCCACTATGGGACAAGTACATAAATCAAAGTCACCCTCATTTTCAAGATTGTGTCACAAGTTGA 1611 0.4227 MRRRAADFRRPVRRRFSYWIWLLLAFSSILALLLFLLQHNHHHQDPHHYPLPERNARVEHFAKENLNFTQEILSVKSFSRQLAEQMILAKAYVVIAKEHNNLHLAWQLSSKIRNCQLLLSKAAITGEPITLEEAEPIIKSLSLLMFKAQDIHYDISTTIVTMKSHIQALEERVNAAIVQSTVFGQIAAEAVSKSLHCLNVKLMSDWLKIPSLQELSDERKNSPRLVDNNLYHFCIFSDNVLATSVVVNSTVSNADHPKQLVFHIVTNGVSYGVMLAWFLRNDFKGATIEIQNIEEFHWLNASYSPLVKQLLNPDSRTFYFGAYQDLNVEPKMRNAKYLSLLNHLRFYIPEIYPQLEKVVFLDDDLVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYVNFSNSVISSRFDPQACAWAFGMNIFDLVAWRKANVTTKYHYWQEQNADGTLWKLGTLPPALLCFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKLAIGRYKPLWDKYINQSHPHFQDCVTS* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1886 536 CDD GT8_like_1 231 524 - -
Pvu3g1886 536 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 536 IPR029993 GO:0047262
Pvu3g1886 536 PANTHER HEXOSYLTRANSFERASE 3 536 - -
Pvu3g1886 536 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 534 IPR029044 -
Pvu3g1886 536 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 233 533 IPR029044 -
Pvu3g1886 536 Pfam Glycosyl transferase family 8 235 510 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1886 Pvu-Chr3 39411559 39415515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1886 1 533 Glycosyltransferase AT2G20810 54.647 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1886 K13648 - gmx:100805886 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1886 3 39411559 39415515 Pvu3g1886 3 39411559 39415515 ECH
Pvu3g1886 3 39411559 39415515 Pvu9g2099 9 30100948 30105450 PCT