Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1881 ATGGAGCTGTGGAACAAAGCCCGAAGCTTTGCGGAAGAAGCATCGAAACGATCTAATGATCTGTCCTTGGGAGCTTCCAAATTGAGCGACATCATTACAGAGACCACAAAAGAGATAGCGGCGCAAGCTTCCAAGCACTTGCCCCAACCTTTTCTCACAAACGACGTCGATCTCCACCGTTTTGGCATCACCGAAGAGTTGAGAGAGTTCGTCAAAGGGATCACCATCACTACCTTTGAAGATTTCCCCCTCCGAGATGATACGGAATTTTCTGATGTTCCTGCGGTTTCAAACGTCAGGCAGGATCTAAGTGATTGGCAGGAAAAACATGCCAGTCTTGTTCTTTCTACCGTGAAGGAGATTTCTCGATTGAGGTATGAACTGTGTCCACGAGTCATGAAAGAGAGGAAGTTTTGGAGAATATATTTTATACTTGTGAATAATCATACTGCACCCTATGAGAATCAGTACATGGAAGATGAAAAACTAAAATCTTGTGAACAAGTAAAAGATCACATAGTCACGATGCGGCCATTAAATCCTGAATTGATCTGTAATCAAGAGGCGCAGGAAGTGCAAAAAGATACCAAATTATCCAATTCATCAACTGGGCAAGACTTGGATGAATTTCTTCTGGGAGAAGGAAACAGTGATGACGAGCCCGATGATGGCGATAGAAGATACGATGATGATTTGGACAAACTGATGGATAATTCGGATGACGAGAAAGGAAAATCATAG 741 0.4291 MELWNKARSFAEEASKRSNDLSLGASKLSDIITETTKEIAAQASKHLPQPFLTNDVDLHRFGITEELREFVKGITITTFEDFPLRDDTEFSDVPAVSNVRQDLSDWQEKHASLVLSTVKEISRLRYELCPRVMKERKFWRIYFILVNNHTAPYENQYMEDEKLKSCEQVKDHIVTMRPLNPELICNQEAQEVQKDTKLSNSSTGQDLDEFLLGEGNSDDEPDDGDRRYDDDLDKLMDNSDDEKGKS* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1881 246 PANTHER BSD DOMAIN-CONTAINING PROTEIN 54 242 - -
Pvu3g1881 246 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 46 - -
Pvu3g1881 246 ProSiteProfiles BSD domain profile. 105 150 IPR005607 -
Pvu3g1881 246 SUPERFAMILY BSD domain-like 62 154 IPR035925 -
Pvu3g1881 246 Gene3D BSD domain 81 161 IPR035925 -
Pvu3g1881 246 MobiDBLite consensus disorder prediction 212 226 - -
Pvu3g1881 246 Pfam BSD domain 103 149 IPR005607 -
Pvu3g1881 246 PANTHER BSD DOMAIN PROTEIN 54 242 - -
Pvu3g1881 246 PANTHER BSD DOMAIN PROTEIN 1 46 - -
Pvu3g1881 246 MobiDBLite consensus disorder prediction 195 246 - -
Pvu3g1881 246 SMART wurzfinal6 98 150 IPR005607 -
Pvu3g1881 246 MobiDBLite consensus disorder prediction 227 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1881 Pvu-Chr3 39354840 39362607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1881 3 221 EF-hand Containing Proteins AT1G69030 39.236 1.93e-52 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1881 - - gmx:100527562 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1881 3 39354840 39362607 Pvu3g1881 3 39354840 39362607 ECH