Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1870 ATGCAGCTCCAAGGAACACCATCTGCTCTTGGATTCCACATGCCTGCAGAGTGGGAAACCCACACTCAGTGTTGGATGGGTTGGCCTGAACGCCCCGATAACTGGCGAGAGGGCGCTGCACCCGCCCAACGTGTGTTTGCGAGGGTGGCATCTGCCATCTCGAAATTTGAGTCTGTTACTGTTTGTGCCAGTTCTGCGCAGTGGGAGAATGCACGAAGTCAGTTGCCTGAACATATCAGGGTGGTTGAGATGAGTATGAACGATTCTTGGTTTCGTGATTCTGGACCCACTTTTGTTGTGAGAAGAAGCACCACGACACAATCTGGTGGTGCAGTTGACAGAATTGCAGGGATTGACTGGCAATTTAATAGTTGGGGGGGTTTAGAAGATGGATGCTATAGTGATTGGAGTCTTGATTTGCTTGTGGCTAAGAAGATTTTGGGAATTGAGAAGATTCCTAGATTTTCGCATTCAATGGTGCTTGAAGGTGGAAGCATCCATGTGGATGGAGAAGGAACTTGTCTTACAACAGAAGAGTGCCTCTTGAACAAGAACAGGAACCCTCACTTGAGTAAGGACCAAATAGAGGATGAACTTAAGGCATATCTTGGAGTCAGGAAGGTTATATGGTTGCCTCGTGGATTATATGGGGATGATGATACAAATGGTCACATTGATAACATGTGCTGTTTTGTGAGGCCCGGTGTGGTTATTCTGTCTTGGGTTGATGATGAAACTGATCCTCAGTATGAAAGATCTATAGAAGCTTACTCTTTGCTTTCAAGTGAAACAGATGCTAATGGTAGAAAATTTGAAATCATTAAAATCCATGTTCCCGGTCCACTCTATATGACAGAGAGCGAGTCTGCTGGGATTTCCCAGGACGGTGAGGCTAAGCCAAGACCTCCTGGTACTAGACTTGCTGCTTCCTATGTAAACTTCTACACTGCAAATAAAGGTATCATTGCACCACAATTTGGAGATAAAAAGTGGGATGACGAAGCTATCCGAGTCCTATCTAATACCTTCCCTCATCATGAAGTTGTGGGAGTTGAAGGTTGCAGGGAGATTGTTTTGGGCGGTGGAAATATACACTGTGTTACTCAGCAACAACCGGCACCTTAA 1125 0.4551 MQLQGTPSALGFHMPAEWETHTQCWMGWPERPDNWREGAAPAQRVFARVASAISKFESVTVCASSAQWENARSQLPEHIRVVEMSMNDSWFRDSGPTFVVRRSTTTQSGGAVDRIAGIDWQFNSWGGLEDGCYSDWSLDLLVAKKILGIEKIPRFSHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLSKDQIEDELKAYLGVRKVIWLPRGLYGDDDTNGHIDNMCCFVRPGVVILSWVDDETDPQYERSIEAYSLLSSETDANGRKFEIIKIHVPGPLYMTESESAGISQDGEAKPRPPGTRLAASYVNFYTANKGIIAPQFGDKKWDDEAIRVLSNTFPHHEVVGVEGCREIVLGGGNIHCVTQQQPAP* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1870 374 Hamap Agmatine deiminase [aguA]. 5 373 IPR017754 GO:0009446|GO:0047632
Pvu3g1870 374 Gene3D - 2 373 - -
Pvu3g1870 374 PANTHER AGMATINE DEIMINASE-RELATED 1 373 IPR007466 GO:0004668|GO:0009446
Pvu3g1870 374 PANTHER AGMATINE DEIMINASE 1 373 - -
Pvu3g1870 374 SUPERFAMILY Pentein 3 373 - -
Pvu3g1870 374 TIGRFAM agmatine_aguA: agmatine deiminase 6 373 IPR017754 GO:0009446|GO:0047632
Pvu3g1870 374 Pfam Porphyromonas-type peptidyl-arginine deiminase 13 372 IPR007466 GO:0004668|GO:0009446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1870 K10536 - gmx:100811750 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1870 3 39230869 39242222 Pvu3g1870 3 39230869 39242222 ECH