Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1868 TTTTGGGATTCCGAACATCTCTTTCTCCGTCGTGGTTGCACTCACTCACTCCGATATCAAAACGGCGCCATGCCTACCGTCAGCGTGGGGCGGGATCGCCTTTTTGCGGCTGTAGGAAGAACTTACACGCAAGAGGAATTCGAAGACTTGTGCTTCAGTTTCGGGATCGAGCTCGACGACGTCACGACGGAGAAGGCAATTGTAAGGAAAGAGAAGCATCTGGATGAAGAAGAAGCTGATGAGGACGAAGAAGTTATTTACAAGATCGAAGTTCCCGCCAATAGATATGACCTCCTGTGCCTTGAAGGGCTTGCTCAAGCTCTCCGAGTTTTCTGTGAGATCCAGGAGATCCCCACTTATAGATTGTCTGACATTAGTAAGAATGCAATGCTGAAAATGCATGTGAAGCCAGAGACTTCTGTGGTTCGTCCATTTGTTGTATGTGCTGTATTAAGAGGTGTAACTTTTGATAAGGCAAGATACAACAGCTTTATCGATCTCCAAGACAAGCTTCACCAAAACATATGTCGGCGAAGAACACTTGTTGCCATAGGAACCCATGATCTGGACAAATTGGAGGGTCCTTTCACATACGAGGCTTTGCCACCTTCGAGTATAACTTTTACACCACTAAAGCAGGAAAGGAGCTTCAGGGCTGATGAGTTAATGGAGTTCTACAAATCAGATTTGAAACTGAAGAAATTCTTGCATATAATTGAGGATTCCCCTGTTTTCCCTGTATTATATGACAGTAAGAGAACTGTGTTATCTTTACCCCCAATTATTAATGGTGCTCACTCAGCCATCACTCTGGATACAAAGAATGTATTTATTGAATGTACTGCTACTGATCTGACAAAGGCGAAGATTGTTTTAAATACAATGGTAACAGCCTTCTCAGAATATTGTGCAAACAAATTTGTCATTGAACCAGTTGAAGTGATTTCTTCTGATGGCAAGTCCAACATATACCCTGATTTATCTGTCTACAATATGGAAGTTTCTCTATCTTACATTACTGGATTGATTGGGGTATCACTGGAGGCAGAAGAGGTCACTAAGTTCTTAAATCGGATGCAATTGCATGCTAAGCAGTCTACATCTGCTAAAAAGCAGTCTAACTTTATAGTATCTGTACCTCCTACGAGAAGTGACGTTCTTCACCCTTGTGATGTTATGGAGGATGTGGCAATTGCTTATGGATTCAATACTATTAAGGATAAGGCTGTAGCTGATAATAAGGGCTCAAAGAGGTTGGCTGCTTCCCTGACTCTACTTCCACTGAACGAGATTAGTGATCTTATTCGAAAAGAGGTTGCATTGATTGGGTTTACAGAGGTCTTGACATTCATACTTTGTTCTAAAAAGGAAAACTTTGCCATGCTTAACCGCAAAGATGATAAATCTAAAGCAGTTATCATTGGAAACCCCAGATCTTCAGACTTTGAGGCTGTGCGAACTAGTCTTATGCCTGGCATTTTGAAAACTGTTGCTCACAACAAGGATCATCCAAAGCCAATCAAGATTTTTGAAGTGGGTGATATATCACTTTTGGATGATAATAGAGATGTTGGTGCAAAAAATATTCGCCAACTTGCTGCTCTGTACTGTGGTGCTAATGCCGGATTTGAGATAATTCACGGCTTGGTCGACAGAGTAATGGAAAAGAACGGTGTTTCCTTTGTTCCACCTGGTGATAAGTCGGGCTATTACATTGAGCAGTCAGATGAACCCGAGTTTCTTGCTGGTAGACAAGCTAGAATCATTTACAAGGGAAAGCATGCTGGCACTTTTGGCATTGTTCATCCCGAGGTACTAAACAACTTCGACATTCCTGATCCCTGCTCCTTTGTTGAACTTAATGTCGAAAGTTTCCTATGA 1881 0.4189 FWDSEHLFLRRGCTHSLRYQNGAMPTVSVGRDRLFAAVGRTYTQEEFEDLCFSFGIELDDVTTEKAIVRKEKHLDEEEADEDEEVIYKIEVPANRYDLLCLEGLAQALRVFCEIQEIPTYRLSDISKNAMLKMHVKPETSVVRPFVVCAVLRGVTFDKARYNSFIDLQDKLHQNICRRRTLVAIGTHDLDKLEGPFTYEALPPSSITFTPLKQERSFRADELMEFYKSDLKLKKFLHIIEDSPVFPVLYDSKRTVLSLPPIINGAHSAITLDTKNVFIECTATDLTKAKIVLNTMVTAFSEYCANKFVIEPVEVISSDGKSNIYPDLSVYNMEVSLSYITGLIGVSLEAEEVTKFLNRMQLHAKQSTSAKKQSNFIVSVPPTRSDVLHPCDVMEDVAIAYGFNTIKDKAVADNKGSKRLAASLTLLPLNEISDLIRKEVALIGFTEVLTFILCSKKENFAMLNRKDDKSKAVIIGNPRSSDFEAVRTSLMPGILKTVAHNKDHPKPIKIFEVGDISLLDDNRDVGAKNIRQLAALYCGANAGFEIIHGLVDRVMEKNGVSFVPPGDKSGYYIEQSDEPEFLAGRQARIIYKGKHAGTFGIVHPEVLNNFDIPDPCSFVELNVESFL* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1868 626 Pfam Phe-tRNA synthetase beta subunit B1 domain 24 112 IPR040659 -
Pvu3g1868 626 Gene3D Bira Bifunctional Protein; Domain 2 426 626 IPR045864 -
Pvu3g1868 626 SUPERFAMILY PheT/TilS domain 135 299 - -
Pvu3g1868 626 SUPERFAMILY Class II aaRS and biotin synthetases 399 625 IPR045864 -
Pvu3g1868 626 SMART B5_2 329 402 IPR005147 GO:0000287|GO:0003723|GO:0005524|GO:0006432
Pvu3g1868 626 TIGRFAM pheT_arch: phenylalanine--tRNA ligase, beta subunit 24 626 IPR004531 GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432
Pvu3g1868 626 Pfam tRNA synthetase B5 domain 332 402 IPR005147 GO:0000287|GO:0003723|GO:0005524|GO:0006432
Pvu3g1868 626 Gene3D - 24 112 - -
Pvu3g1868 626 CDD PheRS_beta_core 427 625 IPR041616 -
Pvu3g1868 626 SUPERFAMILY Putative DNA-binding domain 28 118 IPR009061 -
Pvu3g1868 626 Gene3D - 124 328 IPR020825 -
Pvu3g1868 626 PANTHER PHENYLALANINE--TRNA LIGASE BETA SUBUNIT 24 626 - -
Pvu3g1868 626 SUPERFAMILY Putative DNA-binding domain 331 406 IPR009061 -
Pvu3g1868 626 PANTHER PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 24 626 IPR045060 GO:0004826|GO:0006432
Pvu3g1868 626 Pfam Phenylalanyl tRNA synthetase beta chain CLM domain 427 621 IPR041616 -
Pvu3g1868 626 ProSiteProfiles B5 domain profile. 327 407 IPR005147 GO:0000287|GO:0003723|GO:0005524|GO:0006432
Pvu3g1868 626 SMART B3_4_2 142 304 IPR005146 GO:0003723|GO:0004826
Pvu3g1868 626 Gene3D - 330 405 - -
Pvu3g1868 626 Pfam B3/4 domain 143 303 IPR005146 GO:0003723|GO:0004826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1868 K01890 - gmx:100805249 1154.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1868 3 39199745 39208246 Pvu3g1868 3 39199745 39208246 ECH