Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1854 ATGAATTTTCTAGATGAAGACGAGAAATCTGATTTGGAAGGTCGTTTTTTGGGGACTACTTCACAGTTTGATACATTTGGTTTCACAGCTGCTGACGTTGCTCGCAAACAAGCTGAGAAGGAACAGAAACAGAGGCCATCCATAATACCTGGACCTGCTCCTGATGAAATAGTTGTTCCGGCCACTGAGTCTGTTGGGGTAAAGTTGCTCTTAAAGATGGGGTGGAGTCGTGGCCGCACAATCAAGGATTCACATTCTGATGCACTGTATGATGCCAGAAGACAGGCACGCAGAGCTTTCTTAGCATTTTCTTCTGATGATCCCAAAGTGAAAGTATCAGAGTCTGAGTCTGTCAAGGGTGATATTGAAAATTTTCTTGAGGAACCTGTGAATGACGATGTTCAGATTTCTAAGAGCACACCGGTTTACGTACTCAACCCAAAGCAAGATCTGCACGGATTAGGTTTTGATCCTTACAAGCATGCTCCAGAGTTTAGAGAGAAAAAAAGATCATGCCTAGCCAACAAAGGGGGACTTGGGTTCTCTAGAGATAGTCTTTTTGGTTTAAAGTCAGGAAAGGCTGCCCCCGGCTTTGGCATTGGAGCTCTGGAGGAGCTTGATGCTGAGGATGAGGATGTCTATGCCACTGGTTACGAATTTGAAGATGCTTATGTTCAAGAAGTAGAAGAACCTTCAACATTGAGATTGGAAAACCGGACAAAGAAAGAGCTGAAGGATCAGGGTGATCTGCCTGGCTTTAGAGTTGCATCCAATTCTGACTATAAAATGGAAAGATTTGAGTCTCCTCTGATTCCTAAGGATTTTTTGCCCCACCATAAATTTTCTGGACCACTTGACATTAACCGTAAGACCTATGAAGTTACTCCACCAGACACTCCTCCTCCAGACGATGGCAATTTAAAATTATTAATTGAAGGGGTTGCTAATCTGGTAGCTAAATGTGGAAAATTATATGAGGATTTATCTAGAGAAAAGAACCTATCAAATCCATTGTTTAGTTTTCTTTCTGGAGGAACTGGCCATGAATATTATGCTAGGAAATTGTGGGAGGCACAGCAGAAACACAATGATCAGACTAGTCAGCAATTGGATGGAAAAATGATTCCCAGTGTGAAGAAGCTAACAGCTGAGAGCCGAGGCCAGATATTAGGGGAAAAACCTCTAGAAAAAAGCTCCCAAGATCCATCCTCATTTGTTGCTTCTACAGATATTCAACTCCAATTTAATCTTACTGATACATTTACCAAGTCTGCATCAGTTAGCGAGTTGATGGATATAGAAAAGCCTTTCAAAGATGATCCAGCAAAGGAAGAAAGATTTGAGCAGTTCCTCAAGGAGAAATATAGAGGGGGATTGCGCTCTGCAAGTTCTAGTTTAGCTAGTGACATGTCAGAGGCTGCTCGTGCTCAAGAAAGACTAAGTTTTGAGGCTGCAGCTGAGGCAATAGAAAAGAGACGACAGGGCAAGGGGAGCAAGCCTTTAACTCCATTTGCCATGGATTTCATCCCAGGTGGTGTTATGCAGTTTACTTCTGGTGAAGTACAGCCAAAAAAAGACCTGCAAGCTGAAGATATTTTGAGGAAGAAAATGCACCCTAAGAGGGAAGAGTTTCAATGGCGCCCTTCACCTCTTTTGTGCAAACGCTTTGATCTTATTGATCCGTATATGGGGAAGCCACCACCTGCTCCACGGATTAGGAGTAAAATAGATTCGTTGATTTTTACATCAGATTCAGTCAAAGGTATCAAAGTGGACGACCCTGTTACTTCAAAGAAAGAAATCTCACCTTTGCAGCAATCTACTAATGAAGACATAATCAAAAGTATTACTGAAAATGAAACTGAAGGGGACGTGGAAGTCGAAAATATTGAAAGGCCAGTTGACCTGTACAAGGCTATTTTCTCCGATGATTCAGATGACGAAGGGGGAGATTCTGGTATTGGGAGAGTGGATAATCAAGAAAAGAAAGCCGAAGTAGCTAATACAGCATTGAGCCGATTGATTGCTGGTGATTTTCTGGAATCATTGGGCAAGGAACTAGGAATTGAGGTTCCTCCTGATATGCCTTACCCCATGCAGAAGTCCAAGAACATTGCACCTAAGAAAGACCTTGTTAATGAAGATACGAGAACGGACATCCTTGACAGTCAAAATAATGACGAGATATCCTTAAATCATGATTTGCCATATGATCAGCATATTGCTCGTGAGGGTGGTGTATCAAAAGGTGACACTATTCATGGAAATAATCCTGAGAGCAGTAATGTTAAAACCAAGGGAACAAGTACCATGAACTATAAACGCGACAAGTCTGATGGGGAGAATATTGAAGATGTCAGGAAAATTAAATCGCCTCTAGTCCGCAGACAAGACTATAGTAGCACTTCAGAAGAAGAAAAAAGCAGAAAGCGATCTAGTAGGGCAAAATATGATGACAGGAAAATTAAAACCCCTGTAACACACCGCCGAGATTATAGTAGCAGTTCTTCTTTAGAAGAGGAAAAGAGCAGAAAACGTTCTAGACATCATCGTCATAAGAAGCGTGATGCAGGAAGGGATTCATCCAGTGATGATGAAAGAAGAGATAGACACAGTTCAAGGTCAAAAGGGAGAAAGAAAGGTTCTTCCCGAGAAAAAGGCAGAAGTGAAAAACACTCAAAACATCACAAACACAGAAAACATGAATCTCCAAATAGACACCCACGTTAA 2730 0.4168 MNFLDEDEKSDLEGRFLGTTSQFDTFGFTAADVARKQAEKEQKQRPSIIPGPAPDEIVVPATESVGVKLLLKMGWSRGRTIKDSHSDALYDARRQARRAFLAFSSDDPKVKVSESESVKGDIENFLEEPVNDDVQISKSTPVYVLNPKQDLHGLGFDPYKHAPEFREKKRSCLANKGGLGFSRDSLFGLKSGKAAPGFGIGALEELDAEDEDVYATGYEFEDAYVQEVEEPSTLRLENRTKKELKDQGDLPGFRVASNSDYKMERFESPLIPKDFLPHHKFSGPLDINRKTYEVTPPDTPPPDDGNLKLLIEGVANLVAKCGKLYEDLSREKNLSNPLFSFLSGGTGHEYYARKLWEAQQKHNDQTSQQLDGKMIPSVKKLTAESRGQILGEKPLEKSSQDPSSFVASTDIQLQFNLTDTFTKSASVSELMDIEKPFKDDPAKEERFEQFLKEKYRGGLRSASSSLASDMSEAARAQERLSFEAAAEAIEKRRQGKGSKPLTPFAMDFIPGGVMQFTSGEVQPKKDLQAEDILRKKMHPKREEFQWRPSPLLCKRFDLIDPYMGKPPPAPRIRSKIDSLIFTSDSVKGIKVDDPVTSKKEISPLQQSTNEDIIKSITENETEGDVEVENIERPVDLYKAIFSDDSDDEGGDSGIGRVDNQEKKAEVANTALSRLIAGDFLESLGKELGIEVPPDMPYPMQKSKNIAPKKDLVNEDTRTDILDSQNNDEISLNHDLPYDQHIAREGGVSKGDTIHGNNPESSNVKTKGTSTMNYKRDKSDGENIEDVRKIKSPLVRRQDYSSTSEEEKSRKRSSRAKYDDRKIKTPVTHRRDYSSSSSLEEEKSRKRSRHHRHKKRDAGRDSSSDDERRDRHSSRSKGRKKGSSREKGRSEKHSKHHKHRKHESPNRHPR* 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1854 909 MobiDBLite consensus disorder prediction 770 844 - -
Pvu3g1854 909 MobiDBLite consensus disorder prediction 642 662 - -
Pvu3g1854 909 MobiDBLite consensus disorder prediction 688 909 - -
Pvu3g1854 909 MobiDBLite consensus disorder prediction 733 747 - -
Pvu3g1854 909 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 1 2 835 - -
Pvu3g1854 909 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 1 831 903 - -
Pvu3g1854 909 Gene3D Surp module 279 365 IPR035967 GO:0003723|GO:0006396
Pvu3g1854 909 MobiDBLite consensus disorder prediction 857 872 - -
Pvu3g1854 909 SUPERFAMILY Surp module (SWAP domain) 289 360 IPR035967 GO:0003723|GO:0006396
Pvu3g1854 909 MobiDBLite consensus disorder prediction 889 909 - -
Pvu3g1854 909 MobiDBLite consensus disorder prediction 707 722 - -
Pvu3g1854 909 Pfam Surp module 310 357 IPR000061 GO:0003723|GO:0006396
Pvu3g1854 909 SMART surpneu2 308 360 IPR000061 GO:0003723|GO:0006396
Pvu3g1854 909 MobiDBLite consensus disorder prediction 753 769 - -
Pvu3g1854 909 ProSiteProfiles SURP motif repeat profile. 310 354 IPR000061 GO:0003723|GO:0006396
Pvu3g1854 909 PANTHER BNACNNG56020D PROTEIN 2 835 - -
Pvu3g1854 909 PANTHER BNACNNG56020D PROTEIN 831 903 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1854 K13123 - gmx:100796934 1329.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1854 3 39118764 39130166 Pvu3g1854 3 39118764 39130166 ECH