Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1846 ATGGTGCAAGACTCTGAGAAGAGATTCCATTCCATCATGGACAAGCTCTTCCATCCTCCCAAACCCCCGTCCTCATCCAGTTCATCTGGAGTGCAGTTATCAGGGAGTAAGAAACGTCCTTACCAGTCAGGGTTGATGGAGTTGAATCGGAGAGGGGATGTTGCTGATGGACAGCAGTCCTCCTCGGCAGCGACCACGGCACTGCAGGGACCACTCTGCCGACCGTGGGATCGTGGTGATTTTATGAGAAGATTAGCTACATTCAAATCTATCTCATGGTTTGCTAAACCAAAGGTAGTGAGTGCAGTAAATTGTGCTAGTAGAGGTTGGATCAATGTGGATATTGACACCATAGCCTGTGAAGCATGTGGAGCACGTCTTCTTTTCTCTACACCAGCATCTTGGAATCAGCAACAGGTGGAGAAGGCAGCATTAGTATTTAGCTTAAAGTTGGGTAATGGACATAAATTACTTTGCCCATGGATTGATAATGCCTGCAATGAAACACTGGCACGATTTCCTCCTACAACTCCTGAGATATTAGTTGAAAATTTCAGAAAACACTGTTTTGCACTCTTACAACTATCAGCTCTTCCACAAATTTCATCTTCAGCTATAGCCTACATTCAAAGCCAAAGCCCACTTCTGGAAGACTTTCTTGGACAATCTTTGCTGCTGGAGTATGGAAATGGATCTACTGAAAATTTTGGGATTGGGGATCTTAATAGTCAGGAGGAACTGAAATTTTATTATCAGGCTCAAAAGCTTATAAGTTTATGCGGTTGGAAACTTCGTCCTCTACCTTATGTAGTTGATTGTAAGGATTTATCAGATCAGTCTCTAAAAAAATCAACTACTCTTGCAATTCATTCTGTTGGCACTGATGAAAATAAAATAGATGAAAATTCCATGGATTCTATTGGGGAACAAGTGGATCCAAATTCTGCAGTATTAGATTGCACCCTATGTGGAGCCACTATTGGATTGTGGGCATTCTGTACTGTTCCCCGGCCAGTGGAATCATTCAGACTAGTGGGATATGCTGAAGTGAATGGTGAAAATGCTTGTGTGGTCCACAATTTACTGAATAAAGATGATCTTGAAAATAGGCAGGGTGCCAGGCCTGATGTTGCAAATTCATCAAAGGATACTTCTTCAAGTCTAAATATGACAATTGCAGGGGGGCCTCCCCCAACAAAGCAAAACTTTAAAGCAATAATATCTCTGCCTGTTATTGGTCAGAATTTAAGGGCTCGTCTTTCTTATGATTCTAATTTTAGGGATCATGCTTTTGTTAACAAAGGTGGTAATGAATCAAATTTACAGGAGAAAACTGACAATATCATTAATTCTTCTATTGGAGAACTTGTTCCCGAGTCATCTGAACCCAGGGAGACCGCAGATTATGAAAATGGTTCTCAAACAAGGATCTGTGATTCAGATGTTATCGTGGACACCCATCATGCAGGACAATCATTTTGTCTTAACGATAAGATGACTACACACACAGATGCTGATAAATTGAATAGTTCAGCTGCTGGATATTGTAGTGGTGCTCAGAAAGACTCTGCAGAAGGTGAAGCACTTTCTGTTTTGCGTAAGACTTCCGATGGCAAAGTTGGTACTGACAGAGAAGAGAATCCTATTGGTAGTGAAGATGTACATTCTAGTATAGAGAAGTTTAAGAACCCAGCACCTTCTGATAAAGCAACGGAATTTGATCCAATCCGGCAGCACAGACACTTCTGCCCCTGGATTGCATCAATAAATGATGGGGAACCTGGGTGGAAACAAACATTATCTGCTCTGTATCATCAGAAAAATCCGTTGCCGCGTTCACCAAATAGATCCCCCTCATCTTTTCCCATTGTTAAGGTGGATGATCCTGTGGGTTCAATTAGAAAGCTTTTCATGTCTCCATCAACGAAGAGAATGAAGTCCACTCATAATATGGGGCAAAATACATAA 1968 0.4157 MVQDSEKRFHSIMDKLFHPPKPPSSSSSSGVQLSGSKKRPYQSGLMELNRRGDVADGQQSSSAATTALQGPLCRPWDRGDFMRRLATFKSISWFAKPKVVSAVNCASRGWINVDIDTIACEACGARLLFSTPASWNQQQVEKAALVFSLKLGNGHKLLCPWIDNACNETLARFPPTTPEILVENFRKHCFALLQLSALPQISSSAIAYIQSQSPLLEDFLGQSLLLEYGNGSTENFGIGDLNSQEELKFYYQAQKLISLCGWKLRPLPYVVDCKDLSDQSLKKSTTLAIHSVGTDENKIDENSMDSIGEQVDPNSAVLDCTLCGATIGLWAFCTVPRPVESFRLVGYAEVNGENACVVHNLLNKDDLENRQGARPDVANSSKDTSSSLNMTIAGGPPPTKQNFKAIISLPVIGQNLRARLSYDSNFRDHAFVNKGGNESNLQEKTDNIINSSIGELVPESSEPRETADYENGSQTRICDSDVIVDTHHAGQSFCLNDKMTTHTDADKLNSSAAGYCSGAQKDSAEGEALSVLRKTSDGKVGTDREENPIGSEDVHSSIEKFKNPAPSDKATEFDPIRQHRHFCPWIASINDGEPGWKQTLSALYHQKNPLPRSPNRSPSSFPIVKVDDPVGSIRKLFMSPSTKRMKSTHNMGQNT* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1846 655 MobiDBLite consensus disorder prediction 533 553 - -
Pvu3g1846 655 MobiDBLite consensus disorder prediction 21 39 - -
Pvu3g1846 655 Pfam C3HC zinc finger-like 75 200 IPR012935 GO:0008270
Pvu3g1846 655 MobiDBLite consensus disorder prediction 1 15 - -
Pvu3g1846 655 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 645 - -
Pvu3g1846 655 MobiDBLite consensus disorder prediction 367 388 - -
Pvu3g1846 655 MobiDBLite consensus disorder prediction 537 553 - -
Pvu3g1846 655 MobiDBLite consensus disorder prediction 374 388 - -
Pvu3g1846 655 MobiDBLite consensus disorder prediction 1 39 - -
Pvu3g1846 655 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1846 Pvu-Chr3 39044262 39049244 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1846 - - gmx:100799942 1028.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1846 3 39044262 39049244 Pvu3g1846 3 39044262 39049244 ECH