Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1834 ATGGCGAAACCTCGCAAGCCCAAGAATAACGAAGACCCCAAGCCCGAAAACTCTGGTGCCCTAGTTCACCACCAAAAGCTATGCCTCTCAATCGACATCGACAAACGCCTAGTCCACGGGTACACTGAATTGGAGATTGCGGTGCCGGAGATTGGGATCGTAGGGTTGCATGCGGAGAATTTAGGGATTGAGAGTGTTTGGGTCGATGGTGAGCCCACGGAGTTCGAGTATTACCCGCATCAGCAGCAGCAGGTGGGAGATGATAAGAGGTTTAGTTCTGTGTGTTCTCCTAGCTCTGCTGCCGATGCTGCTGTCTCAGTGTACATGTCCTCTCTGGAGAAGGAGCTGGTGCCCAATTTACTCATTAACTGCTGTAAACCTACCAAGGCTGAAAGTGAACAGCAGCCGGAGCAACCAGTTCCCGAGAACGGGTTTCACTCCTCGGCCGAGCCCAAACAGAATGTGAGAATTGTTCGTATTGACTATTGGATAGAAAAGGCAGAGACAGGAATCCACTTCAGAAATAATCTTCTTCATACTGATAATCAGATAAGGAGAGCAAGATGTTGGTTCCCCTGTATAGATGACAATTCACAACGATGCTGCTATGACCTGGAGTTCACAGTATCACACAATCTTGTGGCTGTTAGTACGGGATTCTTGCTTTATCAGGTCTTAAGCAAGGACAATCCTCCTCGGAAAACATATGTCTATAAATTGGATGTTCCAGTTGCTGCAAGGTGGATATCTTTGGCTGTTGCCCCATTTGAAATTCTTCCTGATCACCAATTTAGTCTCATATCACACATGTGTTTGATGCCTAATCTATCAAAGATGCGGAATACAGTGGAATTTTTCCATAGTGCCTTCAGCTGCTATAAGGATTATCTTTCTGTAGACTTCCCATTTGACTCATATACGCAAGTTTTCATAGAGCCAGAGATGGCTGTGTCTTCAATGAGTTTAGGAGCCTCTGTGAGTATATTTAGTTCACAAGTTTTGTTTGATGACAAGGTTATTGACCAGACTATTGACACACGGGTAAAACTTGCATATGCTCTTGCAAGACAGTGGTTTGGGGTGTATATCACTCCTGAGGCACCAAATGATGAGTGGCTCTTGGATGGACTTGCTGGCTTCTTGACAGATTTTTATATCAAGAAACATTTGGGAAATAATGAGGCACGGTACCGGAGATACAAGGCAAATTGTGCTGTTTGCAAAGTTGATAATGGTGGAGCGACAGCTTTGAGCTGTTCAGCTTCCTGCAAAGATTTATATGGAACTCAGTTTATTGGGTTGTATGGAAAAATAAGATCTTGGAAGTCTGTGGCTGTTCTTCAGATGTTGGAAAAGCAAATGGGTCCTGAATCTTTCCGTAGAATTTTACAAACAATAGTTTCACGGGCTCAAGATAAAACGCGTTCCATGAAGACTCTAAGTACTAAGGAGTTTCGACATTTTGCCAATAAGGTTGGGAATCTTGAACGTCCATTTCTTAAGGATTTCTTTCCACGGTGGGTTGGTTCTTGTGGATGTCCCGTTCTAAGGATGGGGTTTTCCTATAACAAAAGGAAGAATATGGTTGAATTGGCTGTGTTGCGAGGATGTACAGCATTGCAGACTTCAACTACATCCAGTCTTGATATTAATCCTGATACAGAAAATCGAGATGGAGATACTGGATGGCCTGGTATGATGAGCATCAGGGTATATGAACTTGATGGTATGTATGACCATCCAATTCTGCCAATGGCTGGAGAAGCATGGCAGCTATTGGAAATACAATGCCACTCAAAGCTTGCTGCTAGACGCTTTCAGAAGCCCAAGAAAGGATTAAAACATGATGGATCTGATGATAATGGTGACGTGCCTTCCATGGACGTGCGGTCAAATACCGAGTCGCCTTTATTATGGATCAGAGCAGATCCTGATATGGAGTACCTTGCTGAGGTTCATTTTAACCAACCAGTTCAGATGTGGATCAATCAATTAGAGAAGGACAAAGATGTTATTGCCCAGGCACAAGCAATTGCAGCCCTTGAGGCATCACCACAACTATCATTTTCAATTGTAAATGCCCTAAACAATTTTCTCAGTGACTCCAAGGCCTTTTGGAGAGTACGGATTGAAGCGGCATTTGCATTGGCAAATTCTGCATCTGAGGAAACTGATTTTTCTGGTCTACTCCATTTGGTGAAATTTTACAAGAGTAGGAGGTTTGATCCTGACATTGGACTCCCAAAGCCAAATGATTTTCACGATTTTGCCGAGTATTTTGTTCTTGAGGCTATTCCACATGCTGTTGCCATGGTTAGAGCCGCTGACAGGAAAAGCCCAAGAGAAGCTATTGAGTTTGTTCTACAGCTATTGAAGTACAATGACAACAATGGGAATCCCTACTCAGATGTCTTCTGGCTTTCTGCATTAGTCCAATCAGTTGGTGAGCTTGAGTTTGGGCAACAGAGTATTCTCCTGTTGTCATCACTTCTCAAACGCATTGACCGGCTTCTACAATTTGATAGTCTCATGCCAATATACAATGGAATCCTGACTATCAGTTGTATCCGAACATTGACCCAGATTGCTTTAAAGCTTTCGGGGTTCATTCCTCTTGATCGAGTTTATGAACTTGTAAAGCCTTTTCGTGACTTGAAGACACTGTGGCAAGTTCGAATTGAAGCAAGTAGAGCACTCCTTGATCTTGAATTCCACTGCAAGGGCATGGATTCAGCATTGCTTTTATTTATCAAGTACTTAGAGGAGGAGAATTCCTTAAGAGGGCAGTTAAAGCTAGCCACCCATGTTATGAGGCTATGTCAGATGAGGGATGGATTGAATTCAGATGAGGAAATTACAAGCCAAACTCTAGTCTCTATGCTTAATTTACTGGAAGGGCGTACTGCATTTAATAATGTCTTTCTCCGGCATTATCTGTTCTGCATACTACAAATAATTGCTAGAAGACCACCAACTCTTCATGGGATTCCCAGGGAAAATAGAACGTTGCATATGAGTCTTACAGAAGCTTGTAACTATCAGAAGAACATTTTTGTTCTTGATTCGGATAGTAAACCTTTGGATCTGCCAAGCTCTACCCAAAACCCTACACCAAATCTTGGCCTGGATGGTTTGAGCGATGCACTTTACGAAGCTTCTAAGGACCAACCTACTGAAGCTCCACCGCAGGAGCACATTGAAGCTCTTCTAAAGGAAGCGACCCTAGAGAAAGCTGAAGAGGGATTTACTGAAATTCCACAGGAAGCACCAATGGAAGTTCCAATTGAAGTTTCCAAGGAAGCAGATACTGTATCGAATAGCCATGAAAGAAAGAGGCTCATTAAAATAAAGGTCAAACAATCTTCTGCTACCAGTAGGGCTGATACTGATAATCAAGTGGTTGAACGTTCTTTAGGTGGTCGTAATGAAATGGATCATGGAGCTAGCAGTTCAGTTTCTGTAGATGCACCGCAGAGGAATTTTGCCGAGACTCTTAGCATCAGTAATCACAATATAGATGAAGTTAATTCTTGGCATGATCGTGGTTCGCGCATGACTGCTAGCATTGGTAGTGCTAAATTTTTGAGTGACGGTGATGAATTGGTCAAAGAACTTCAGTGCACTGCTGATTCAAGTATAGTTTATTCACAACCTCAGCCTGAAGATCCGTCATCGTCCAGTATTATCCAGGATAACAATGTAGATGCGGATGCACGACGATATGCCAGCCTTCAAACTCTTTCAGTTGCAAGATTTGATCCTGATGGAGAATCGTTAGGTAAAGAAATTTCTGCTCGTGGCAAGGAAAAGCACAAAAGCAAGGAAAAGAAACGAAAACGGGAAAGTAATAAAGACCATGATGATCCAGAATATTTGGAGCGAAAACGATTAAAGAAGGAGAAAAAACGACGGGAAAAAGAAATGGCAAAACTTCAGAGTGATGAAGCGAAGAGATCCTCTGTAGACTTGTCGAGTAAGAAAGAGGAAGCTTTAGTGGACGTTGCTAGACAGGTTAAATCTGTTGAGCCCAGCGGATTTAATTCTAAATTAGAAACCAAAAAGATTGATATCAAACCGGATCCATCTGAAGGCACATCTACTGGTCCAAAAATTCGAATTAAAATTAAAAACCGAATGCTCAACAAGTGA 4149 0.4249 MAKPRKPKNNEDPKPENSGALVHHQKLCLSIDIDKRLVHGYTELEIAVPEIGIVGLHAENLGIESVWVDGEPTEFEYYPHQQQQVGDDKRFSSVCSPSSAADAAVSVYMSSLEKELVPNLLINCCKPTKAESEQQPEQPVPENGFHSSAEPKQNVRIVRIDYWIEKAETGIHFRNNLLHTDNQIRRARCWFPCIDDNSQRCCYDLEFTVSHNLVAVSTGFLLYQVLSKDNPPRKTYVYKLDVPVAARWISLAVAPFEILPDHQFSLISHMCLMPNLSKMRNTVEFFHSAFSCYKDYLSVDFPFDSYTQVFIEPEMAVSSMSLGASVSIFSSQVLFDDKVIDQTIDTRVKLAYALARQWFGVYITPEAPNDEWLLDGLAGFLTDFYIKKHLGNNEARYRRYKANCAVCKVDNGGATALSCSASCKDLYGTQFIGLYGKIRSWKSVAVLQMLEKQMGPESFRRILQTIVSRAQDKTRSMKTLSTKEFRHFANKVGNLERPFLKDFFPRWVGSCGCPVLRMGFSYNKRKNMVELAVLRGCTALQTSTTSSLDINPDTENRDGDTGWPGMMSIRVYELDGMYDHPILPMAGEAWQLLEIQCHSKLAARRFQKPKKGLKHDGSDDNGDVPSMDVRSNTESPLLWIRADPDMEYLAEVHFNQPVQMWINQLEKDKDVIAQAQAIAALEASPQLSFSIVNALNNFLSDSKAFWRVRIEAAFALANSASEETDFSGLLHLVKFYKSRRFDPDIGLPKPNDFHDFAEYFVLEAIPHAVAMVRAADRKSPREAIEFVLQLLKYNDNNGNPYSDVFWLSALVQSVGELEFGQQSILLLSSLLKRIDRLLQFDSLMPIYNGILTISCIRTLTQIALKLSGFIPLDRVYELVKPFRDLKTLWQVRIEASRALLDLEFHCKGMDSALLLFIKYLEEENSLRGQLKLATHVMRLCQMRDGLNSDEEITSQTLVSMLNLLEGRTAFNNVFLRHYLFCILQIIARRPPTLHGIPRENRTLHMSLTEACNYQKNIFVLDSDSKPLDLPSSTQNPTPNLGLDGLSDALYEASKDQPTEAPPQEHIEALLKEATLEKAEEGFTEIPQEAPMEVPIEVSKEADTVSNSHERKRLIKIKVKQSSATSRADTDNQVVERSLGGRNEMDHGASSSVSVDAPQRNFAETLSISNHNIDEVNSWHDRGSRMTASIGSAKFLSDGDELVKELQCTADSSIVYSQPQPEDPSSSSIIQDNNVDADARRYASLQTLSVARFDPDGESLGKEISARGKEKHKSKEKKRKRESNKDHDDPEYLERKRLKKEKKRREKEMAKLQSDEAKRSSVDLSSKKEEALVDVARQVKSVEPSGFNSKLETKKIDIKPDPSEGTSTGPKIRIKIKNRMLNK* 1383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1834 1382 Pfam Peptidase family M1 domain 284 481 IPR014782 GO:0008237|GO:0008270
Pvu3g1834 1382 MobiDBLite consensus disorder prediction 1120 1157 - -
Pvu3g1834 1382 MobiDBLite consensus disorder prediction 1255 1269 - -
Pvu3g1834 1382 MobiDBLite consensus disorder prediction 1253 1330 - -
Pvu3g1834 1382 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 275 517 - -
Pvu3g1834 1382 MobiDBLite consensus disorder prediction 1304 1330 - -
Pvu3g1834 1382 Gene3D - 654 932 IPR011989 -
Pvu3g1834 1382 SUPERFAMILY ARM repeat 444 993 IPR016024 -
Pvu3g1834 1382 Coils Coil 1292 1319 - -
Pvu3g1834 1382 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 19 1315 IPR037813 GO:0005669
Pvu3g1834 1382 CDD M1_like_TAF2 24 508 - -
Pvu3g1834 1382 MobiDBLite consensus disorder prediction 1120 1136 - -
Pvu3g1834 1382 MobiDBLite consensus disorder prediction 1280 1296 - -
Pvu3g1834 1382 MobiDBLite consensus disorder prediction 1352 1382 - -
Pvu3g1834 1382 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 18 254 IPR042097 -
Pvu3g1834 1382 Gene3D tricorn interacting facor f3 domain 20 253 IPR042097 -
Pvu3g1834 1382 Gene3D Neutral Protease Domain 2 264 512 IPR027268 -
Pvu3g1834 1382 MobiDBLite consensus disorder prediction 608 630 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1834 K03128 - gmx:100792795 2449.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1834 3 38930021 38953455 Pvu3g1834 3 38930021 38953455 ECH