Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1815 ATGATTAATTTCTTCACCGGAGACATTAAGGCACGCGCAATAACGATAACGTGTGTGGTGCAGCAGCAGCGTGAGATGGACGCTGTAGTAACAGGTTCGGAGCTGAACAAGTCCAGGAGCGGAGGTTCGGAGCGGAGCGATGACAGCGGAGGAGGGATATTTGAGTACTCTGGTTGGGTTTACCACTTGGGAGTCAACTCCATTGGTCATGAGTACTGTCATCTCCGATTCCTCTTCATCAGGGGAAAGTATATCGCCATGTACAAGCGTGATCCTCATGAAAGCCCTGGCATTAAACCAATTAGGCGGGGAGTTGTTGGACCCACGCTAATGGTGGAGGAGCTAGGTCGTCGAAAGGTCAACAATGGGGATCTTTATGTTTTACGGTTTTACAATCGATTAGATGAGACCAAAAAAGGAGATATTGCTTGCGCTACAGCTGGGGAGGCTAGGGGATGGATGGAAGCATTTGACCAAGCTAAGCAACAGGCCGAGCATGAGCTGTCAAGAGGAGTTAGTGCTAGAGACAAACTAAACATGGAGAACGAGATCAATCTTGAAGGACATCGACCTAGAGTGAGGCGATATGCCCATGGTTTGAAGAGGCTCATAAGAATTGGCCAAGGCCCTGAGAAATTGTTACGACAATCATCAAAGTTGTCTTCTAGAACAGATGGGTTTGAAGGGGACGTAGGAGATGCAGTTGAAGCACATCAATGGAAATGTGTTCTTACTTTGGCTGGTATTAGAATTTTTGAGGATGTTTCTGATAACAAGAATGGTAAGACTGTCCTTGCAAAGTCTGTTGGTGTTATTGATGCAACTGCAGATACTGTTTTTGAAGTTATTTTGAGCACTGAACAACAGAAAAGATATGAGTGGGATACATTGATATACAACTTGGAACTTATTGATTCTTATGATGGACACTACGATGTTGTTTATGGGACATATGATTCTAAGTATCTATCTCGGTGGCACTCAAAGCAGGATTTTGTCTTCTCTAGACAATGGTTTCGTGGACAAGATGGAACATATACCATCTTGCAATGTCCAGCTGTACACAAGAAAAAGCCCCAAGTACCCGGATTTCGACGTGCAAAAGTTAATCCATCTTCATGGGAGATTAGAAATTTGAACACATCTATGGCATCAAATAACCCAAGATGTTTAGTGACCCACACTTTAGAGATAGACTCTTCGGCCTGGTCTCGATGGAAGAACAACCAGAACTCAAAATTTCAGAGGAGCATTCCACATGCATTATTGTTCCAAGTGGCTGGTCTGAAGGAATACATTGCTGCCAATCCTGCACTCCACCACGAAAATGCCACCACAGTTGTTCATTCCAAAATCTCTGATGCTTCTATTTCTAGTGCTGAATGTGAGGATGAAATGCAGGATGAGTTTTATGATGCAGTTACTGCTGATTCGTCAACATCAGATGAAGAAAGTGATGATGATCAAAAACTTGTTCTGCAGGAGCCAAGAGTCAAGCTGAAGAATATTTCATGGGCAATCGCATCATTAGCTTTAAAGCGAACTGCAGGTAAGCTTTTACTTTGTTACTTGTGTTAA 1578 0.4328 MINFFTGDIKARAITITCVVQQQREMDAVVTGSELNKSRSGGSERSDDSGGGIFEYSGWVYHLGVNSIGHEYCHLRFLFIRGKYIAMYKRDPHESPGIKPIRRGVVGPTLMVEELGRRKVNNGDLYVLRFYNRLDETKKGDIACATAGEARGWMEAFDQAKQQAEHELSRGVSARDKLNMENEINLEGHRPRVRRYAHGLKRLIRIGQGPEKLLRQSSKLSSRTDGFEGDVGDAVEAHQWKCVLTLAGIRIFEDVSDNKNGKTVLAKSVGVIDATADTVFEVILSTEQQKRYEWDTLIYNLELIDSYDGHYDVVYGTYDSKYLSRWHSKQDFVFSRQWFRGQDGTYTILQCPAVHKKKPQVPGFRRAKVNPSSWEIRNLNTSMASNNPRCLVTHTLEIDSSAWSRWKNNQNSKFQRSIPHALLFQVAGLKEYIAANPALHHENATTVVHSKISDASISSAECEDEMQDEFYDAVTADSSTSDEESDDDQKLVLQEPRVKLKNISWAIASLALKRTAGKLLLCYLC* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1815 525 ProSiteProfiles START domain profile. 240 423 IPR002913 GO:0008289
Pvu3g1815 525 SUPERFAMILY Bet v1-like 234 404 - -
Pvu3g1815 525 CDD START 236 433 - -
Pvu3g1815 525 Pfam START domain 262 404 IPR002913 GO:0008289
Pvu3g1815 525 PANTHER PLECKSTRIN-LIKE (PH) AND LIPID-BINDING START DOMAIN PROTEIN 45 519 - -
Pvu3g1815 525 Gene3D - 233 444 IPR023393 -
Pvu3g1815 525 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 45 519 IPR045096 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1815 Pvu-Chr3 38615118 38625431 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1815 - - pvu:PHAVU_003G175600g 1047.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1815 3 38615118 38625431 Pvu3g1815 3 38615118 38625431 ECH
Pvu3g1815 3 38615118 38625431 Pvu9g2149 9 30837604 30843948 PCT