Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1788 ATGGACTGGTTCTCCTGGCTATCCAGAACCACTCTTGAGCCTTCTTTAATCTACGACTATGGCCTCACCTTTGCACGCAATGAGCTTCAATTGGAAGATGCTTGCTACTTTAACCACGAGTTTCTTCAGAGCATGGGCATCTCAATTGCCAAGCACAGGCTAGAGATTCTGAAGCTTGTGAAGAAGGAAGGAGGAGGAGGAGGAGGACGTCCGAAGAAGCTCTCTGGGGTCATCAAGAAGTGCCTTAGGAAGTGCATGAACAAGTTTGTTTCTCGTGATGATGATCATGTAGTGAAAGGCGTGCCCTCCTTGACGCATGTGTCAATGGCACCACCTGAGATTAATTGGTATGAAGGGAAACTGAGAGGGTCAACGGTTGTGAGGAAGCAACAAGAAGGGAGTGAAGATGGTAAGGAAGAGAAGCCTCTGCCTGTGCCCCCCGTGTACAGAAGCAGAACCATAGCACTTTCAGGACCTTTGGATGGCAGTAGAATCATGCAAGACAAAATGCTCCACAACAAGGCCTTGAAGCTATCTGGACCACTTGATGGAAGAATGCATGAGAGAATGATCATCAACTCTAATAGAAGCCCTTTAATACCTAGGCCTTTGGATGCAAGATTTGTAGCCACAACAAAGAGTCCAAGAGTCTCAGGGCCTCTGGATCCAAGACTCATGGCTGCTGAGATCAAAAGCCCAAGACTGCCAAGGCCTTCCGATTTCACAAGGGCTGACATTGAAAGCCCAGTGTCTTACAGTCCTTATAACAAGCCCAAAGCTGATTTTGATTATGATGATGATCACACACTCTGGCCTTCACTGTTTCAAGATCTGAAACCAACTTGA 846 0.4693 MDWFSWLSRTTLEPSLIYDYGLTFARNELQLEDACYFNHEFLQSMGISIAKHRLEILKLVKKEGGGGGGRPKKLSGVIKKCLRKCMNKFVSRDDDHVVKGVPSLTHVSMAPPEINWYEGKLRGSTVVRKQQEGSEDGKEEKPLPVPPVYRSRTIALSGPLDGSRIMQDKMLHNKALKLSGPLDGRMHERMIINSNRSPLIPRPLDARFVATTKSPRVSGPLDPRLMAAEIKSPRLPRPSDFTRADIESPVSYSPYNKPKADFDYDDDHTLWPSLFQDLKPT* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1788 281 CDD SAM_superfamily 2 62 - -
Pvu3g1788 281 Gene3D - 1 65 IPR013761 -
Pvu3g1788 281 SUPERFAMILY SAM/Pointed domain 6 62 IPR013761 -
Pvu3g1788 281 PANTHER STERILE ALPHA MOTIF (SAM) DOMAIN PROTEIN 1 281 - -
Pvu3g1788 281 MobiDBLite consensus disorder prediction 126 146 - -
Pvu3g1788 281 PANTHER OSJNBA0033G05.11 PROTEIN 1 281 - -
Pvu3g1788 281 MobiDBLite consensus disorder prediction 129 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1788 Pvu-Chr3 38383113 38385469 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1788 - - gmx:100775936 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1788 3 38383113 38385469 Pvu9g2186 9 31379224 31380048 PCT