Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1777 ATGGGTTGTCAGATAAGGCTTCTGGGTCTGTGTCTATGGATGTACTTGGCAAGCTTAAGCTTCATTGGAGTGGGTGCTGTGTATGGAAGAGGAGGAGCAGTTGAGAAAGGGATTGTTTTAGTTCATGGGAAAAGTGCTATAGGAAGGATTGATAATGATTTTATCTGTGCAACTCTGGATTGGTGGCCTCCTCAGAAATGTGACTATGGAAAATGTAGTTGGGGTCAGGCTTCTCTGCTTAATCTGGACCTCAACAGCAAAACTTTGTTGAATGCTATAAAAGCCTTTTCATCCTTGAAACTTAGATTAGGTGGCACTTTGCAAGACAAGGTCATATATGGAACTGAAGATAATCGGCAACCCTGTACTCCTTTTGTTAAGGCTGATGAAATGTTTGGTTTCACTGGAGGGTGCTTACCGATGTCTAGGGTTAAGGCTATCTTTGGATTAAATGCTCTTGCTGGAAAATCTATAAAGTCTGGTTTTGCTGTTGGACCTTGGAACTACACCAATGCTGAATCTTTAATACGATACACTGTCAGAAAGAAGTACCACATTCATGGTTGGGAACTTGGGAATGAACTGTGTGGAAATGGAATTGGGGTAAGTGTTACAGCAGATCAATATGCTTCTGATGTAGTTGCTTTAAGAAATATAGTTCAAAGTGCATATAGAGGGATTGAGCCAAAGCCACTTGTTGTTGCACCTGGAGGCTTCTTTGAATTCAATTGGTTCAAGGAATTTATAAGCAAATATAATAAATCCGCAGATGTGATCACCCACCACATTTATAACCTTGGGCCAGGAGTTGATGACCACATAACTGAAAGAATTCTTGACCCTTTCTATCTGGATGGAGAGGCTAACACATTCAACAGGCTCAAAGGTATACTTCAAAGTTCATCATCACACAAGGTAAAATCATGGGTTGGTGAGTCAGGAGGGGCCTATAATAGTGGTCATCATCTTGTGTCTGATGCATTTGTCAACAGTTTCTGGTATTTGGACCAGCTTGGCATGTCAGCTGTTTATGACACCACAACATACTGCAGACAAACTTTGATAGGAGGAAACTATGGTTTACTGAATACTAGTACTTTCATGCCAAATCCAGACTACTATAGTGCACTTCTATGGCACCGACTCATGGGAGGGCGTGTCCTTTCAACCACCTTCTACGGTACAAAGAAGATAAGAAGTTATGCACACTGTGCAAAGGAATCCAAAGGGATCACAATACTATTGCTCAACTTGGACAACAGCACCTCTGTTCAAGTCAACGTGGACTTAACATTTAACAAGTTACCTCACCATAGAGTGGATGAACCAGCCAGACGAGAATACCATTTGACAGCACCAGACAGAAATATACATAGCCAAATCATGTTGCTAAATGGAAAAGCTTTAAGTGTAAATTCAGCTGGTGAAATTCCTCCTTTGGAACCTGTATATGTAGACTCAACAAAACCAATAACTGTTGGTCCTTTATCTATTGTATTTGCTCATATACCAAATGTTCTTCTTTCAGCATGCAGATAG 1539 0.4074 MGCQIRLLGLCLWMYLASLSFIGVGAVYGRGGAVEKGIVLVHGKSAIGRIDNDFICATLDWWPPQKCDYGKCSWGQASLLNLDLNSKTLLNAIKAFSSLKLRLGGTLQDKVIYGTEDNRQPCTPFVKADEMFGFTGGCLPMSRVKAIFGLNALAGKSIKSGFAVGPWNYTNAESLIRYTVRKKYHIHGWELGNELCGNGIGVSVTADQYASDVVALRNIVQSAYRGIEPKPLVVAPGGFFEFNWFKEFISKYNKSADVITHHIYNLGPGVDDHITERILDPFYLDGEANTFNRLKGILQSSSSHKVKSWVGESGGAYNSGHHLVSDAFVNSFWYLDQLGMSAVYDTTTYCRQTLIGGNYGLLNTSTFMPNPDYYSALLWHRLMGGRVLSTTFYGTKKIRSYAHCAKESKGITILLLNLDNSTSVQVNVDLTFNKLPHHRVDEPARREYHLTAPDRNIHSQIMLLNGKALSVNSAGEIPPLEPVYVDSTKPITVGPLSIVFAHIPNVLLSACR* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1777 512 PANTHER HEPARANASE-RELATED 3 511 - -
Pvu3g1777 512 PANTHER HEPARANASE-LIKE PROTEIN 3 3 511 - -
Pvu3g1777 512 Pfam Glycosyl hydrolase family 79, N-terminal domain 38 339 IPR005199 GO:0016020|GO:0016798
Pvu3g1777 512 SUPERFAMILY (Trans)glycosidases 50 383 IPR017853 -
Pvu3g1777 512 Gene3D Glycosidases 71 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1777 Pvu-Chr3 38277301 38280551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1777 31 511 Glycoside Hydrolase AT5G61250 45.087 4.38e-156 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1777 K07964 - gmx:100778008 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1777 3 38277301 38280551 Pvu3g1777 3 38277301 38280551 ECH
Pvu3g1777 3 38277301 38280551 Pvu9g2190 9 31453794 31457916 PCT