Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1478 ATGGTTGATGCAGAGAGGCGGCTATTAGCAAATGCCCTTCAAGATCCTGACAACCAGCAATTTGTTCTACTGTCTGATAGCTGTGTGCCTCTGTATCATTTTGATTATATTTACAACTATCTGATGCATACAAATATCAGCTTTGTTGACTGCTTTAAGGATCCCGGTCCTCATGGAAATGGCAGGTATTCAGATCACATGCTTCCTGAAGTTGAGGTGAAGGACTTTAGAAAGGGTGCACAGTGGTTTGCTATGAAACGGCAGCATGCAATTATAGTGATGGCCGATAGCCTGTATTATTCAAAATTCCGGTCTTACTGCCAGCCCGGTTTGGACGGTCGGAATTGCATTGCTGATGAGCATTACTTGCCAACCTTCTTCCAGATGGTTGATCCTGGTGGAATTGCAAACTGGTCATTAACTCATGTTGACTGGTCTGAGAGAAAATGGCACCCAAAATCTTATAGGGCTCAGGATGTAACTTACGAACTTTTGAAGAATATCACGTCCATCGACGTCAGCGTGCACGTAACCAGTGATGAGAAGAAAGAAGTGCAAAGCTGGCCTTGCTTATGGAACGGGATTCAGAAGCCATGCTACTTATTTGCTAGGAAATTCACTCCTGAAACACTGGATAATTTGTTGCATCTATTTTCCAATTATTCAGCACCATGA 675 0.4311 MVDAERRLLANALQDPDNQQFVLLSDSCVPLYHFDYIYNYLMHTNISFVDCFKDPGPHGNGRYSDHMLPEVEVKDFRKGAQWFAMKRQHAIIVMADSLYYSKFRSYCQPGLDGRNCIADEHYLPTFFQMVDPGGIANWSLTHVDWSERKWHPKSYRAQDVTYELLKNITSIDVSVHVTSDEKKEVQSWPCLWNGIQKPCYLFARKFTPETLDNLLHLFSNYSAP* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1478 224 Pfam Core-2/I-Branching enzyme 1 168 IPR003406 GO:0016020|GO:0016757
Pvu3g1478 224 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 222 - -
Pvu3g1478 224 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 1 222 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1478 Pvu-Chr3 33664480 33669994 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1478 - - gmx:100817202 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1478 3 33664480 33669994 Pvu9g2454 9 34932042 34939766 PCT