Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1476 ATGGGGACTTGTTTTTCTTGTAACTCAACCTCCATATTAAAGAATATCCGTGTGGTTCATATCAATGGTTATGTAGAGGATTTTGAGGAACCAATTTCAGTGAGGCAAGTAATTGGGTACCCCTCAAAACACTTTCTTTGCACTTCCACCCTCCTTCTTTCCACTTCCTCAAAACCAATGAATGGAAACACACACCTCCAACCTGGGCAAGTGTATTTCATGCTGCCATACTCAGTACTACAAGCTGATGTTTCTCCTGTGGACCTGACTGGTCTTGTAAAGAGACTCAGCGCAATAGCCAAAGCAAGTCCTTTGTCGAGCCAGAATCAAACAGTTTGGTGTTCACCTTCTAGGAGTCCTAGCAAAGCTGGTGCGGCAGAGCAATATGGTGTTGGTAAGATGAATATTGGTGGAAGAAGCCCTTGTAAAGTACAATCTTGGAAACCTATCTTGGACACCATATCAGAGAAGCCATACAATAGGAGGAGTGAATCTGATTGGCAAGAAAGTTATTGA 516 0.4283 MGTCFSCNSTSILKNIRVVHINGYVEDFEEPISVRQVIGYPSKHFLCTSTLLLSTSSKPMNGNTHLQPGQVYFMLPYSVLQADVSPVDLTGLVKRLSAIAKASPLSSQNQTVWCSPSRSPSKAGAAEQYGVGKMNIGGRSPCKVQSWKPILDTISEKPYNRRSESDWQESY* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1476 171 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 167 - -
Pvu3g1476 171 Pfam PADRE domain 1 156 IPR025322 -
Pvu3g1476 171 PANTHER OS06G0700300 PROTEIN 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1476 Pvu-Chr3 33632597 33633112 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1476 - - gmx:100785670 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1476 3 33632597 33633112 Pvu3g1476 3 33632597 33633112 ECH
Pvu3g1476 3 33632597 33633112 Pvu9g2450 9 34898323 34899360 PCT