Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1473 ATGGAGACAAAAATAGTCCTCAGTAGGCCATTATCACTGGAGAGGCAATCAGATCAGGAAACAAACTATAAAGCTCCAAACATTTTGCGGCGCATACTAAGTCTTTTTAAGAATGTTCGCCCAGGATCCGATGTCTCTTGCTTCAAGCTTCCACCTGAGTTCAACATGCCCAAGTCAGAGCTTCAGTGCTATGCAGAGTGCGTATATTCCACAGCATTAGACATCCTAAGCAACCTCAACGGTGGCAAAACACCATTGGATAGACTCATATCTGTTGTAGCATGGACCATTTCTGCAGTGCGCCCCTTATGGTTTGGTGTTGCACCTTACAATCCCACTCTTGGTGAGACTCACCATGTTTCCAAAGGAAACCTCAATGTCTTACTGGAGCAGGTTTCACATCACCCTCCGGTGTCTGCTCTCCATGCAACCGATTCTAAGGAGAACATAGAAATTATATGGTGCAATTCTACTGTTCCAAAATTCACTGGTACTTCAGTAGAAGCTCATGTTCATGGCAAACGAGAGCTGAAGCTCCACAATCATGGAGAGACTTATGAAATGAATTCTCCTAATCTCCTGATCAGAATTTTCCCAGTCCCTGGGAATGATTGGTTTGGCAATGTCACTATTCGGTGCATAGAAACAGGTCTTGTGGCAGAATTAAGCTACATAAGCCAATCTTTCTTTGGGTTTGGAACAAATCGGAGACTGATTAAAGGGAAGATTTTTGATTCATTATCTAAGAAAATTCTGTGTAAAATTGAAGGTCATTGGGATAGTACTGTAACAGTGAAGAATACAGACAATGCAGAAGTAAGGGTGATATATGATGCAAAAGAAGTTATATCAGGACTCCAAGCTCCTGTTGTCAAGGATCTAGAGAGAGTGTGGCCAACAGAAACAGTTCTAGTTTGGAATAAATTGAGCGAAGCCATCTTAAGCAAAGACTGGGAAAAGGCAAAAGAAGCAAAGAAAAGTATAGAAGAAAGACAAAGGGAGCTTCACAGAGAAAGAGAATCAAAAGGAGAAAATTGGGTTCCTAAACACTTTTTGGTGTCTTGTAGCAAAGAAAAGGGATGGAACTGTTCACCAATTGAAAAGTGGGTCCCAAACGCTCCTATCATCTCCTTGTAA 1137 0.416 METKIVLSRPLSLERQSDQETNYKAPNILRRILSLFKNVRPGSDVSCFKLPPEFNMPKSELQCYAECVYSTALDILSNLNGGKTPLDRLISVVAWTISAVRPLWFGVAPYNPTLGETHHVSKGNLNVLLEQVSHHPPVSALHATDSKENIEIIWCNSTVPKFTGTSVEAHVHGKRELKLHNHGETYEMNSPNLLIRIFPVPGNDWFGNVTIRCIETGLVAELSYISQSFFGFGTNRRLIKGKIFDSLSKKILCKIEGHWDSTVTVKNTDNAEVRVIYDAKEVISGLQAPVVKDLERVWPTETVLVWNKLSEAILSKDWEKAKEAKKSIEERQRELHRERESKGENWVPKHFLVSCSKEKGWNCSPIEKWVPNAPIISL* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1473 378 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 376 IPR000648 GO:0008289
Pvu3g1473 378 Gene3D - 298 368 - -
Pvu3g1473 378 Coils Coil 318 341 - -
Pvu3g1473 378 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C 1 376 - -
Pvu3g1473 378 Pfam Oxysterol-binding protein 35 362 IPR000648 GO:0008289
Pvu3g1473 378 ProSitePatterns Oxysterol-binding protein family signature. 130 140 IPR018494 -
Pvu3g1473 378 Gene3D - 111 294 - -
Pvu3g1473 378 SUPERFAMILY Oxysterol-binding protein-like 31 363 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1473 Pvu-Chr3 33589550 33592050 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1473 K22285 - gmx:100819769 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1473 3 33589550 33592050 Pvu9g2449 9 34890292 34895036 PCT