Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1456 ATGTGGAATTCCTTCTGGAGATCCAGAGATCGTTTCTCCTTGGACCAACTCAGGTACTTAACCGAACAATTGACGAAGGTACAAATTATTAATGAGGTTAATAAGGGTTTTGTAATTGAGGCACTGAGATCAATTGCGGAGTTGATAACATATGGTGACCAACATGACCCGAGTTTTTTTGAATTCTTCATGGAAAAGCAAGTCATGGGTGAATTTTTACGTGTTCTGAAACTTACCAGGACTGTGAGCGTTCCACTTCAGTTGCTGCAAACAGTGAGCATTATGGTCCAGAACCTAAAAAGTGAACATGCTATATACTATATGTTCAGTAATGAATATATAAATTACCTGATAACTTATCCGTTTGACTTTCGAAATGAAGAGCTGCTGTCGTACTACATATCCTTTTTAAGAACAATAAGTGGAAAATTGAACAAGAATACAGTTTCACTGCTTGTGAAGACTCATGGTGATGAAGTAGTTTCATTTCCACTGTATGTAGAGGCCATACGCTATGCTTTTCACGAGGAGAGCATGATTCGCACTGCGGTACGAGCTGTAACTCTTAATGTCTACCATGTTGGAGATGACTCTGTCAATAGATATATAGCCAGTACTCCTCACAAAGATTACTTCTCAAACCTGGTTTCATTTTTTAGGAAGCAGAGCATGGATTTAAATAAACTGCTTTCTGATACACAGCTAAATCCGGGCCCAGATTCAATGTCTGCAATTATCGCTGCTGTAGATGAAATTGAGGATAATCTGTACTACTTCAGTGATGTTGTCTCTGCTGGAATTCCTGATGTTGGGAGACTGATTACTGATGGCATTATGATGATTTTGATATTCCCATTACTTCTTCCTTCCCTAAGGGTCATGCCTAATAATGACATGCAAGATGGTGCTTCTCTTTCTCTGTACTTACTTTGTTGCATCCTGAGGATTGTCAAAATCAAAGATTTGGCGAATACCGTTGCTGCTGCCCTTTTTTATCCCTCAGAGGCCTTTACAAAGAGTTCTCGGGGTTTTCATTCAGATGGTGTTCTAGTGCAAAATGATTGTACCAGTTCAAATTTGTCTTTAAGGGAGGTTTTGCTTGCTTACGTATCAAAAGGAAATGATATCCTTGTTTTGGGTTCGTTGAGTGTGCTTGCTACGCTGCTGCAAACTAAAGAACTTGATGAATCAATGCTAGATGGGCTTGGAATTCTTCCACAACGAAAACAGCATAAAAAACTATTATTGCAAGCTTTAGTTGGTGAGGGTTCAGGCGAAGAAGAACTTTTTTCATCCAAAAGCAGTAGGGATGGCATTGGTAATGATATCAATGTCTATCATAAAAAGATAAAGGAGCAGTATGGTGTATCTTTTCTGCCTTTGGATGCGGGAATAAGTCCTCATATACATAGATTTCAAGTGATTGATGCATTAGTGAGCCTCAGTTGTCGCTCTAATATATCTGCAGAGATACTATGGGATGGCGGTTGGCTTTTGCGCCAGTTGCTTCCTTACAGTGTGTCAGAATTCAACAGTCATCACCTTGAATTACTGAAAGTTTCATACAAGAATTATGCTTCTGCTCTTGTAGAGGAGGCTAGAGGTAGTTGGTCCGATTTACTTATTTCTGTTCTCTGTGATGAATGGAGAAAGTGCAAAAGAGCAATGGAGTCATCATCTCCTAGGAAAGAACCAAATTGCATACTTTTGCTACCATGGAAGATTTCTTCAGGAGGTCATGTTCCAGAGGAGTCGTCCTTTGCCGCTGGAAAAAGAATGCATGAGTTGGTGAAGGTATTTGTACTACTGCACCAGCTTCAAATATTCACTCTTGGCAGAGCTTTATCAGAGCAACCACTAATTTACCCTCCTGGTGATCTCCATGCAAATTTCCGTGCCCGAGGTTCTGGGCTTGATGTCTCGGGCCCAAAGGCAGGAACTGAAGTCAGCCTTGGCAATGCCCTGCCTTGTAGGATAGCTTTCGAGAGGGGGAAAGAGCTCCATGTTTACTTTCTAGCAATCTCTTTAGGAATTTCTGGGTGGCTTGCTCTTGCAGAAGAATTGCCATTGAAGAAGTCTCATGGAGTGGTTCGGTCTGTTGCCCCTTTGGCTGGATGCAATCCTAGGATTGATGATAATCATGCAACGTGGTTACACTTGAGGATTCGGGCTTCCTCTTTACCCTTTGTAGATCCTGCCCAAATCAAAGATTACGGGAAAAAGAAAACAAAAGCTTCGGTAGATGGCAGATGGACATTGGCGTTCAGAGATGAGGAGACTTGCAAGTCTGCTTTTCTCATGATTGTTGAGGAAAACAATTTTCTGAGTAATGAGGTTCATAGAAGACTAAAACCTTTGTTCAACCTTGAAACTGCAATAGATTTATCAGGTTCGTCTTTATGTTTTCCAGAGGATTCCTCGTCGTATAGAACACATCCCAATTAA 2445 0.4086 MWNSFWRSRDRFSLDQLRYLTEQLTKVQIINEVNKGFVIEALRSIAELITYGDQHDPSFFEFFMEKQVMGEFLRVLKLTRTVSVPLQLLQTVSIMVQNLKSEHAIYYMFSNEYINYLITYPFDFRNEELLSYYISFLRTISGKLNKNTVSLLVKTHGDEVVSFPLYVEAIRYAFHEESMIRTAVRAVTLNVYHVGDDSVNRYIASTPHKDYFSNLVSFFRKQSMDLNKLLSDTQLNPGPDSMSAIIAAVDEIEDNLYYFSDVVSAGIPDVGRLITDGIMMILIFPLLLPSLRVMPNNDMQDGASLSLYLLCCILRIVKIKDLANTVAAALFYPSEAFTKSSRGFHSDGVLVQNDCTSSNLSLREVLLAYVSKGNDILVLGSLSVLATLLQTKELDESMLDGLGILPQRKQHKKLLLQALVGEGSGEEELFSSKSSRDGIGNDINVYHKKIKEQYGVSFLPLDAGISPHIHRFQVIDALVSLSCRSNISAEILWDGGWLLRQLLPYSVSEFNSHHLELLKVSYKNYASALVEEARGSWSDLLISVLCDEWRKCKRAMESSSPRKEPNCILLLPWKISSGGHVPEESSFAAGKRMHELVKVFVLLHQLQIFTLGRALSEQPLIYPPGDLHANFRARGSGLDVSGPKAGTEVSLGNALPCRIAFERGKELHVYFLAISLGISGWLALAEELPLKKSHGVVRSVAPLAGCNPRIDDNHATWLHLRIRASSLPFVDPAQIKDYGKKKTKASVDGRWTLAFRDEETCKSAFLMIVEENNFLSNEVHRRLKPLFNLETAIDLSGSSLCFPEDSSSYRTHPN* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1456 814 PANTHER PROTEIN TRANSPARENT TESTA 9 340 797 - -
Pvu3g1456 814 PANTHER PROTEIN TRANSPARENT TESTA 9 1 343 - -
Pvu3g1456 814 PANTHER UNCHARACTERIZED 340 797 IPR039272 -
Pvu3g1456 814 PANTHER UNCHARACTERIZED 1 343 IPR039272 -
Pvu3g1456 814 Pfam Uncharacterised conserved protein 42 192 IPR019155 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1456 Pvu-Chr3 33347809 33357456 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1456 K19513 - gmx:100786267 1211.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1456 3 33347809 33357456 Pvu3g1456 3 33347809 33357456 ECH
Pvu3g1456 3 33347809 33357456 Pvu9g2432 9 34659012 34674343 PCT