Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1448 ATGTCTTGTCATGTGAATATTAAGGGTTCGCCGACAGCTGCCATTCTCCGCCATCACCGGCACAATCCACGTGTCCATCACCCTTTTTCTTGCAAACTTTTGTCTCTTCTGTTCATCTTCTCCTTTGTATTCATTCTTCCTCTCCGAAACCAAGTGCCATTGTTACTTCCTCTCTTATTTAGCCTCCCCCATTTCCTTTCTCAGTATTACCCTCTTCTCAAAATGTTCAATTTCTTACTTAGAAAAGAAACTCGAAAGATTCTCAAGCGCAAAGATAGCGATGCTGGGGAAAGAGGAAGAGCACTGGAAGACCTGAGAGGCTCACTGTTTAATGAATTTCGTTCCCCTGAAGGTGCAAAACGACAACAACATCGTACATGTGGTCCAGCTGCAGCACTTGGCTTCAATTTTGTAGTAGCAATTAGTATTATCTTCATGAACAAAATGGTTCTTCAAACTGTTAAATTCAAATTTCCTATTCTTCTCTCACTAATTCACTATGTAGTGAGCTGGCTCTTAATGGCTGTACTAAATGTGTTTTCTTTGCTTCCTGCTTCTCCTTCCTCAAAATCAACTAAGATGTCTGCTTTATTTACTCTTGGATTTGTCATGTCTCTATCTACTGGCCTTGCTAATGTCAGCCTGAAGTATAATAGTATTGGTTTCTATCAGATGGCAAAGATTGCAGTAACACCTTCAATAGTTATGGCAGAATTTGTATTGTATAGGAAGAAAGTTTCTTGGCCCAAGGCTTTAGCATTAACGGTGGTATCTATTGGTGTTGCTGTGGCTACAGTGACAGATCTGCAGTTTCATTTCTTTGGTGCCTGTGTTGCATTAGCGTGGATCGTACCTAGTGCTGTAAACAAAATCCTCTGGTCCAGATTACAGCAACAAGAAAACTGGACTGCTTTGGCGTTAATGTGGAAAACAACACCTATTACTTTAATTTTTCTGGCTGCTATGTTACCCTGCTTAGACCCTCCTGGTGTACTTTCCTTTGATTGGAACTTCATTAACACATTGGTGATACTCACATCAGCCATTCTTGGATTTTTGCTTCAGTTATCTGGGGCTTTAGCACTAGGTGCGACATCTGCGGTCTCGCATGTTGTTCTTGGGCAGTTTAAGACCTGCATTATCCTCTTGGGAAACTATTATCTCTTTGGATCCAATCCTGGCATAATCAGTATCTGTGGGGCCTTTACAGCTATTGTTGGTATGTCTGTTTACACTTGCCTTAATCTGAAGCAGCAAAAAGCCAAGATATTTCCTCATCAGACGTCCCTTTTACCAAAATCTAAACTAAGCAAAGAAAATGGCAGTTCCCATAATGAACATTACAGTGCAGAAAATGTCTAA 1362 0.4068 MSCHVNIKGSPTAAILRHHRHNPRVHHPFSCKLLSLLFIFSFVFILPLRNQVPLLLPLLFSLPHFLSQYYPLLKMFNFLLRKETRKILKRKDSDAGERGRALEDLRGSLFNEFRSPEGAKRQQHRTCGPAAALGFNFVVAISIIFMNKMVLQTVKFKFPILLSLIHYVVSWLLMAVLNVFSLLPASPSSKSTKMSALFTLGFVMSLSTGLANVSLKYNSIGFYQMAKIAVTPSIVMAEFVLYRKKVSWPKALALTVVSIGVAVATVTDLQFHFFGACVALAWIVPSAVNKILWSRLQQQENWTALALMWKTTPITLIFLAAMLPCLDPPGVLSFDWNFINTLVILTSAILGFLLQLSGALALGATSAVSHVVLGQFKTCIILLGNYYLFGSNPGIISICGAFTAIVGMSVYTCLNLKQQKAKIFPHQTSLLPKSKLSKENGSSHNEHYSAENV* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1448 453 PANTHER SOLUTE CARRIER FAMILY 35 88 430 - -
Pvu3g1448 453 Pfam Triose-phosphate Transporter family 135 411 IPR004853 -
Pvu3g1448 453 MobiDBLite consensus disorder prediction 434 453 - -
Pvu3g1448 453 PANTHER NUCLEOTIDE-SUGAR TRANSPORTER FAMILY PROTEIN 88 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1448 Pvu-Chr3 33233473 33238789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1448 134 437 Organic Solute Cotransporters AT1G77610 25.633 4.52e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1448 - - pvu:PHAVU_003G139700g 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1448 3 33233473 33238789 Pvu3g1448 3 33233473 33238789 ECH
Pvu3g1448 3 33233473 33238789 Pvu9g2422 9 34547141 34551332 PCT