Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1419 ATGGCGGTGAAGAAGGCACGAATTGTGATAATTGGAGCAGGAATGGCGGGCCTCACAGCTGCCAACAAGCTTCACAGTGTGAGTGTCTCAAAGAGCTTGTTTGAGGTGTGTGTTGTGGAAGGTGGAAACAGGATTGGTGGGAGAATCAACACTTCAGAGTTTGGTGGTGACCGGATTGAGATGGGTGCTACTTGGATCCATGGAATTGAAGGAAGTCCAATTCACAAAATAGCCCAACAAATCCATGCACTTGAGTCTGACCAGCCTTGGGAGTGCATGGATGGGAATGAAAATAAGACCACCACCATTGCTGAAGGTGGCTTTGTGCTAAACCCTTCCTTTGTTCACCCCATCACCAAGCTTTTCAACAATCTCATGGACCATGCTCAGGGAAAGATGTCAACAGCAACAACAACAAACAAGGGTGACAGCGGAAACCTCAGTGTTGGCTCTTTTCTCAGACAAGGCCTTGATGCTTATTGGGGTTCATCAAAAGAGGAAAAGGAGCTCAAAGGGTTCGGAAAGTGGAGTAGGAAGTTGCTTGATGAAGCAATCTTTGCCATGCACGAGAACACACAGAGGACTTGTACATCTGTTGCTGACTTATTGACTTTGGATTATGGCGCAGAAAGTGAATACCAGATGTTTCCAGGTGAAGAAATCACAATTGCTAAAGGCTACTCAAACATAATTGAATCGTTAGCATCTGTGCTACCACCTGGTTTAGTTCAGTTGGGTAGAAAAGTCACAAGAATTGAGTGGCAACCCGAGAGACACGAGGCGATGAATATGGAAAATGGAACATGTTCTAGGCCTGTGGTGCTACATTTCTCTGATGGCTCTATTATGTCAGCGGATCATGTCATTGTCACGGTCTCACTGGGAGTGCTGAAGGCCTCTATTCATGATGATGATTCAGGTATGTCAATGTTCCATCCCCCTCTACCCTCTTTTAAGGCTGAGGCTATTTCAAGGCTTGGTTTTGGTGTTGTTAACAAGTTGTTCATGCAATTGAGTCCTCCTCATGGAAGAAGAGACGAACACTCCAGAGGGTTCCCCTTCTTGCAAATGGTTTTCCATTCACATCAATCTGAGTTGAAGCACAAGAAAATACCCTGGTGGATGAGGAGGACTGCTACTCTTTGTCCTATCTACAACAATTCTAGTGTCCTCTTATCTTGGTTTGCCGGGGAAGAAGCTCTGGCAATTGAGTCACTCAAAGAAGAAGAGATCAGTAAAGGGGTTTCAGACACAATTTCATGCTTCCTGTCACGTTCAGTTGAGTTTTGCAACGGGAATGTGAAATCTGAAAAGCACTCCTCCCACGAATATAAGGTTAAATTCAGTAAAGTCTTGAAGAGCGAATGGGGAACAGATCCTTTATTTCTAGGCTCATACAGTCATGTGGCAGTTGGATCAAGTGGAGATGATTTTGATACAATGGCAGAACCTTTGCCAAAATGTAGCAGCAGCCACCCTTCTGCTTCACCACCACTTCAAATCTTGTTTGCAGGGGAAGCAACCCACAGAACCCATTATTCCACAACTCATGGAGCTTACTTCAGTGGTCTTAGGGAAGCCAATAGGCTTCTTCAACATTATTCACCCTGTTAA 1614 0.4486 MAVKKARIVIIGAGMAGLTAANKLHSVSVSKSLFEVCVVEGGNRIGGRINTSEFGGDRIEMGATWIHGIEGSPIHKIAQQIHALESDQPWECMDGNENKTTTIAEGGFVLNPSFVHPITKLFNNLMDHAQGKMSTATTTNKGDSGNLSVGSFLRQGLDAYWGSSKEEKELKGFGKWSRKLLDEAIFAMHENTQRTCTSVADLLTLDYGAESEYQMFPGEEITIAKGYSNIIESLASVLPPGLVQLGRKVTRIEWQPERHEAMNMENGTCSRPVVLHFSDGSIMSADHVIVTVSLGVLKASIHDDDSGMSMFHPPLPSFKAEAISRLGFGVVNKLFMQLSPPHGRRDEHSRGFPFLQMVFHSHQSELKHKKIPWWMRRTATLCPIYNNSSVLLSWFAGEEALAIESLKEEEISKGVSDTISCFLSRSVEFCNGNVKSEKHSSHEYKVKFSKVLKSEWGTDPLFLGSYSHVAVGSSGDDFDTMAEPLPKCSSSHPSASPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYSPC* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1419 537 Pfam Flavin containing amine oxidoreductase 15 531 IPR002937 GO:0016491
Pvu3g1419 537 PANTHER POLYAMINE OXIDASE 5-RELATED 1 534 - -
Pvu3g1419 537 SUPERFAMILY FAD-linked reductases, C-terminal domain 327 468 - -
Pvu3g1419 537 Gene3D - 94 474 - -
Pvu3g1419 537 Gene3D - 8 529 IPR036188 -
Pvu3g1419 537 PANTHER FLAVIN MONOAMINE OXIDASE 1 534 - -
Pvu3g1419 537 SUPERFAMILY FAD/NAD(P)-binding domain 1 534 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1419 Pvu-Chr3 32880327 32882415 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1419 K12259 - gmx:100809633 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1419 3 32880327 32882415 Pvu3g1419 3 32880327 32882415 ECH
Pvu3g1419 3 32880327 32882415 Pvu9g2402 9 34297562 34299673 PCT