Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1388 ATGGATAAAGATGCTAGGGCGGAAGAGACTGTTGATTTGCGAACCAATGTGGAGTTAGTGAGATCAGTCTCTGATAATAAGCACCATGATCTTTTAAGGCCATCTGCTCGGAACTATTCAAGAGGACAAGCAACTGATGCAGGTGGCCATGGAAAGGGAAAGTATGCCTTAATTAGAGACCCAGAGGACTTTCAAACTGGAATTTATGATAAGCCCCTTCCATTTTATGGATGTGGAATCGGATGGTTCTCATTTCTTTTTGGGTTTCTATGCCCTCCTATGTGGTTCTACGCTACAATTCTCTATTTTGGAAATCACTACAGAAAGGATCCCAGGGAACGAGCAGGGCTGGGAGCCTCCGCAATTGCTGCATTGGTGTGCTCTGTACTGTTGCTGATAATTTTTGGAGTAATTCTTGTGTTTAAATTACGGTTCCTGTATTTATAA 447 0.4251 MDKDARAEETVDLRTNVELVRSVSDNKHHDLLRPSARNYSRGQATDAGGHGKGKYALIRDPEDFQTGIYDKPLPFYGCGIGWFSFLFGFLCPPMWFYATILYFGNHYRKDPRERAGLGASAIAALVCSVLLLIIFGVILVFKLRFLYL* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1388 148 PANTHER 60S RIBOSOMAL L18A-LIKE PROTEIN 43 139 - -
Pvu3g1388 148 PANTHER 60S RIBOSOMAL L18A-LIKE PROTEIN 43 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1388 Pvu-Chr3 32469200 32474213 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1388 - - gmx:100306083 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1388 3 32469200 32474213 Pvu3g1388 3 32469200 32474213 ECH
Pvu3g1388 3 32469200 32474213 Pvu9g2373 9 33906809 33909798 PCT