Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1375 ATGAGTTTCATCTTCGGAAAGAGGAAAACCCCTGCAGAAATCGTGCGGGAGAATAAGAGAATGCTGGACAAATCAATTAGAGAAATAGAACGAGAGAGACTAGGTTTGCAGTCACAGGAGAAGAAACTGATTTTGGAGATAAAGAAAAGTGCCAAACAAGGCCAGATGGGAGCTGTTAAAGTGATGGCAAAAGATCTTGTTAGAACAAGACATCAGATTGACAAGTTTTATAAGCTCAAATCGCAGCTCCAGGGTGTATCCCTCAGAATTCAAACTTTGAAATCAACACAAGCGATGGGTGAGGCGATGAAAGGTGTGACTAAGGCAATGGGACAGATGAACAGGCAAATGAACTTGCCATCATTGCAGAAAATCTTACAGGAATTTGAGTATCAGAATGAAAGGATGGAACTGATTACAGAGGTGATGGGAGACGCAATGGATGATGCTTTTGAAGGGGATGAGGAAGAAGAGGAAACAGAAGAACTAGTGAATCAGGTTCTTGATGAGATTGGTATCAACATCAATCAAGAGCTTTTGAGTGCACCATCAACAGCTGTTGCTGCCCCAGCTGCAAAGACTAAAGTGCCTCAAGTTGAAACTTCTGGGGATGATGCCGCCATAGATAGCGATTTACAGGCAAGGTTAGACAATTTAAGAAAAATGTAA 669 0.4185 MSFIFGKRKTPAEIVRENKRMLDKSIREIERERLGLQSQEKKLILEIKKSAKQGQMGAVKVMAKDLVRTRHQIDKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKILQEFEYQNERMELITEVMGDAMDDAFEGDEEEEETEELVNQVLDEIGININQELLSAPSTAVAAPAAKTKVPQVETSGDDAAIDSDLQARLDNLRKM* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1375 222 Pfam Snf7 17 186 IPR005024 GO:0007034
Pvu3g1375 222 Coils Coil 12 46 - -
Pvu3g1375 222 Gene3D - 6 180 - -
Pvu3g1375 222 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 1 222 IPR005024 GO:0007034
Pvu3g1375 222 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 1-LIKE 1 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1375 Pvu-Chr3 32341661 32344513 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1375 K12191 - gmx:100819241 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1375 3 32341661 32344513 Pvu3g1375 3 32341661 32344513 ECH
Pvu3g1375 3 32341661 32344513 Pvu9g2367 9 33836857 33841969 PCT