Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1349 ATGACTGCGAACACAGACACGATGTCGATCATTGGCAAAATGTACTGTTCATCGTCTCAGACTGTGCATGTGGTGAGAAAGAGGCCACGCGTGGTGAATGGTGGGGGTTTTGTAGTCATGGATTCTAGTGCCCAGAGGGCTGTGTTCAGTGTCGAGGGTTGTGGTGTTCGTGGCAAAAAGGGAGAGCTGATCCTAAGAGAAGGAGATGGAGGCGCTTTGCTTCTCATGCTTCGGAAGGGAGGCATGGTTGAGGCCTTGAGCATTTACAAGAAGTGGAAAGGTTACAGTTTAGACTACGAAGGATCAAGGAAGCTGGTTTTCAGCTTGAGAGAACCCAATTCTTGTTTGGTTAAGAACAAGGCAATCAGAATCTCCACCAGGAACAGAGGCTGTGATTTTAAGATCAGTGGCTATTTCTCGGACAAGTGTTGTAGCATTGTTGACTCCAAAGGCAACGACGTAGCACAGGTGAGGGTGATGAAGGAAGTGGAGGAAGTGATGGAAAACAATGATTTTTATCATGTGGTGGTGAAACCTGGGATGGATCAAGCTTTTGTTTTTGGAGTCATAGCTATCCTTGATTACATTCATGGGGAATCTACCACCTGCTAA 612 0.4641 MTANTDTMSIIGKMYCSSSQTVHVVRKRPRVVNGGGFVVMDSSAQRAVFSVEGCGVRGKKGELILREGDGGALLLMLRKGGMVEALSIYKKWKGYSLDYEGSRKLVFSLREPNSCLVKNKAIRISTRNRGCDFKISGYFSDKCCSIVDSKGNDVAQVRVMKEVEEVMENNDFYHVVVKPGMDQAFVFGVIAILDYIHGESTTC* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1349 203 PANTHER - 9 202 IPR007612 -
Pvu3g1349 203 PANTHER PROTEIN LURP-ONE-RELATED 6 9 202 - -
Pvu3g1349 203 Gene3D - 8 201 IPR038595 -
Pvu3g1349 203 SUPERFAMILY Tubby C-terminal domain-like 9 197 IPR025659 -
Pvu3g1349 203 Pfam LURP-one-related 11 192 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1349 Pvu-Chr3 31871854 31873055 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1349 - - gmx:100306504 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1349 3 31871854 31873055 Pvu3g1349 3 31871854 31873055 ECH
Pvu3g1349 3 31871854 31873055 Pvu9g2344 9 33527973 33529331 PCT