Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1347 ATGCCTGACCGCGATCTCCGCTGTTCCCTTTGTAGGATTGATTTATTAGTTATCCACAGATTCACATTTTCTTCTGTTTTCCCAAAATTCTCATTCTCTTCATTCTTTTCATTTTCCTCTTTCCAATATTCTCCTATTTTGGCATATAATTTCTTGGAGGTTCAGCAACGTTGCACATTCACACTTTCCATGTTCATCCCAAACAGGATGAAGGTAGGCTTTAATGGATTAAGGGGTAGAGAAATTTCACTTATTTCTATTGTTCTCATGTCTGCAACTATCATTTTTTGGTCATGGGAGAAAATGCCTGGTCTTAATACCTTTCTTCCTCCTCAAACACCACCACTGCAGTTCTCTTCAGATCATTTAGTTACTACTCGTTCAGTCGAAGTGCTTTCACCAGATCTTCGTTTGAGTGAAGATGGCTCATTGTCAGCAAAGACTAAGGCCACCAATGAGTTAAAAAAAGAACTACAGCTGGAGGGAGCATCACAGACGATTCCTATACAAATCTCCTCTGGAAAAAACAATGGTGAAGATGGCTCACCATTATTACCAAAGGAAAAGACCGCTAATGAACCAAAAAATCTACATCTCGAAGGAGCATCACAAACGATTCCTGCACAAACCTCTTATGGTAAAAACATGGGTGAGGATGACCCATCATTGTCAAAAGGAAAGACCTCTAATGAGCTAGGAAAACTGCATCTTGAGGGAGCATCACAGATGGTTCCTGCACAAACCTCTTCTGGGAAAAACACGGGTGAAGATGGCCCATCATTTGCAAAGGAAAAGACCACTAATGATCCAGAAAAACTGCATCTTAAGGGAGCATCACAGATGGTACCCGCACAAAACTCTTCTGGGAAGAACATTGGTGAAGATGACTCATCATTGGCAAAGAAAAAGATCACCAATGAGTCAAAAGAACTACATTTTGAGCGAGCATCACAGATGATTCCTACACAAAACTCTTCTGAAAAGAATGTGGATGAAAGTATTACCAGAAAAACTTCATATACTAAACAAATTCCTTCAAGTGTGTCATATGAAGAAGTAAACGATAAAAGAATCTCAGAAGGTGGGGAAAACCATGATGTACAAACTATTTCCAGCCCAATAATATCCGGGGTTACAAAGAATGAAGCTAAGGAGGAGAAAACTTTGAAACAAAAAGAAGAACATGAGCATATAAATGGTTCTGTGACAAATTCTCCACAAACAAGCTCTTCAATCTTTGGGAAAGATGACAACTGGAATAATTCTACAAAAAGTAAAGTCTGTAATTATGCAAAAGGAAAATGGGTCCCAGACAACAATCGACCTTTATATTCAGGTTTTGGTTGCAAACAGTGGCTATCTACAATGTGGGCTTGCCGCATGATGCAGCGTACTGATTTTGAATACGAGAGGCTTCGGTGGCAACCCAAGGATTGTCAAATGGATGAATTTGAAGGTTCTAAATTCTTGAGAAGGATGCAAAACAAAACTCTAGCTTTTGTTGGAGACTCACTGGGGCGACAACAGTTCCAGTCTTTAATGTGCATGGTCTCTGGTGGTGAGGATAAGCTTCGTGTTGAGGATGTGGGGAGGGAGTATGGATTGGTTATAGCTGATGGTTCTGGCCGTCCTAATGGGTGGGCATTTCGCTTCTCAAGCACTAATACTACCATCCTGTACTACTGGTCTGCAAGCCTTTGTGACGTTGAACCTATTGATATCAACAACCCAAACACAGATTATGCAATGCATCTTGATCGACCACCAGCATTCTTGCGCCAATATCTCCACAAGTTCGATGTATTGGTTCTCAACACAGGTCACCACTGGAATCGGGGAAAACTAAATGCTAATAGATGGGTAATGCATGTTGGTGGTGTGCCAAATACTGATAGGAAGATAGCTGTGATTTGGGGTGCCAAGAATCTTACAATTCACAGCATTGTTGGCTGGGTGGATTCACAGCTTCCAAAATATCCAGGTCTTAAAGCATTCCTTCGGTCCATCTCTCCTCGGCATTTTTTTGGTGGGGACTGGAACACCGGAGGCAGTTGTGACAACACCAAACCAATGTCTGTTGGAAAGGAAATATTGGAAGAAGAGTCTAGTGATCAAGGTGCTGCACATGCGGTAAAAGGAACAGGTGTTAAGCTCTTGGACATAACAGCTCTTTCTCAGCTCAGGGATGAGGCTCATATATCACGGTTCAGTATTACAGCAAAGCCTGGTGTGCAGGATTGCTTACACTGGTGTTTGCCTGGTGTTCCTGATACATGGAATGAGATACTCTTTGCTCAAATCTAG 2304 0.4158 MPDRDLRCSLCRIDLLVIHRFTFSSVFPKFSFSSFFSFSSFQYSPILAYNFLEVQQRCTFTLSMFIPNRMKVGFNGLRGREISLISIVLMSATIIFWSWEKMPGLNTFLPPQTPPLQFSSDHLVTTRSVEVLSPDLRLSEDGSLSAKTKATNELKKELQLEGASQTIPIQISSGKNNGEDGSPLLPKEKTANEPKNLHLEGASQTIPAQTSYGKNMGEDDPSLSKGKTSNELGKLHLEGASQMVPAQTSSGKNTGEDGPSFAKEKTTNDPEKLHLKGASQMVPAQNSSGKNIGEDDSSLAKKKITNESKELHFERASQMIPTQNSSEKNVDESITRKTSYTKQIPSSVSYEEVNDKRISEGGENHDVQTISSPIISGVTKNEAKEEKTLKQKEEHEHINGSVTNSPQTSSSIFGKDDNWNNSTKSKVCNYAKGKWVPDNNRPLYSGFGCKQWLSTMWACRMMQRTDFEYERLRWQPKDCQMDEFEGSKFLRRMQNKTLAFVGDSLGRQQFQSLMCMVSGGEDKLRVEDVGREYGLVIADGSGRPNGWAFRFSSTNTTILYYWSASLCDVEPIDINNPNTDYAMHLDRPPAFLRQYLHKFDVLVLNTGHHWNRGKLNANRWVMHVGGVPNTDRKIAVIWGAKNLTIHSIVGWVDSQLPKYPGLKAFLRSISPRHFFGGDWNTGGSCDNTKPMSVGKEILEEESSDQGAAHAVKGTGVKLLDITALSQLRDEAHISRFSITAKPGVQDCLHWCLPGVPDTWNEILFAQI* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1347 767 MobiDBLite consensus disorder prediction 165 179 - -
Pvu3g1347 767 MobiDBLite consensus disorder prediction 309 340 - -
Pvu3g1347 767 MobiDBLite consensus disorder prediction 243 270 - -
Pvu3g1347 767 Pfam PMR5 N terminal Domain 427 480 IPR025846 -
Pvu3g1347 767 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 483 765 IPR026057 GO:0016740
Pvu3g1347 767 MobiDBLite consensus disorder prediction 165 229 - -
Pvu3g1347 767 MobiDBLite consensus disorder prediction 280 299 - -
Pvu3g1347 767 MobiDBLite consensus disorder prediction 280 294 - -
Pvu3g1347 767 MobiDBLite consensus disorder prediction 400 416 - -
Pvu3g1347 767 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 14 73 767 - -
Pvu3g1347 767 MobiDBLite consensus disorder prediction 197 219 - -
Pvu3g1347 767 MobiDBLite consensus disorder prediction 391 416 - -
Pvu3g1347 767 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 73 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1347 Pvu-Chr3 31845344 31851625 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1347 - - pvu:PHAVU_003G129900g 1143.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1347 3 31845344 31851625 Pvu9g2339 9 33479680 33483540 PCT