Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1338 ATGTTGGGGAAGAGGCCCCGCCCCATGATCGGAAAGTTGTCGGAGTTGTTGGTCTCAAGGGGCCGACCGGTCACGCTTCCGGACGCCGCCGCCGCCGCCCCCACCGCAAGTCCAAGAGGTCCATTAGGCATCATGATGCAGTCTCCAAGAGGCTTGAAGAACTACCACCTCGGCGGAGTTGGTCTTGGAATTGTGGTGGCTCTTGATAAGTCATCCAACGACCTCACACACGAGGTTTTGCCCAAACACGCCGTTTGCACCTCCAATTTGAAAATCCAAGACGAGTTTGATGTGGAGGAATACACCTATGTCACACGCCATGTCCCTAACAAAACGCTCACTAAGGTATACTACAACGGCGCTGAAGGTGAAATTCAGAGACATGACTATCACTATTCTAACACCAACAACAACACCAACACCAACAACCTTGGTGTGTTCAGAAGAACCGCACCGCAACCTTTATTCGAGTCTGAACCATCGTATCCCACATCGAATTTTCTCAGCTCCTGCAACCTATGTGGAAAGAAGCTCCACGGCAAGGACATATACATGTACAGAGGAGAGAAAGCGTTTTGTAGTCCAGAGTGTCGTTCGAATCAAATAATGATGGATGAACGCAAAGAGAGGTGTAGATCAGAAGCATCAAGGTCTGTGGAAATGTCAAGTTCACCTTATACAAGGGAACACATATTTTCAACAGGGATTCTCGTACTCTAG 720 0.4889 MLGKRPRPMIGKLSELLVSRGRPVTLPDAAAAAPTASPRGPLGIMMQSPRGLKNYHLGGVGLGIVVALDKSSNDLTHEVLPKHAVCTSNLKIQDEFDVEEYTYVTRHVPNKTLTKVYYNGAEGEIQRHDYHYSNTNNNTNTNNLGVFRRTAPQPLFESEPSYPTSNFLSSCNLCGKKLHGKDIYMYRGEKAFCSPECRSNQIMMDERKERCRSEASRSVEMSSSPYTREHIFSTGILVL* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1338 239 Pfam zinc-finger of the FCS-type, C2-C2 159 208 IPR007650 -
Pvu3g1338 239 ProSiteProfiles Zinc finger FLZ-type profile. 166 209 IPR007650 -
Pvu3g1338 239 PANTHER OS02G0174800 PROTEIN 98 239 IPR044604 -
Pvu3g1338 239 PANTHER OS02G0174800 PROTEIN 1 89 IPR044604 -
Pvu3g1338 239 PANTHER DUF581 FAMILY PROTEIN 98 239 - -
Pvu3g1338 239 PANTHER DUF581 FAMILY PROTEIN 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1338 Pvu-Chr3 31674198 31675376 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1338 - - vun:114178972 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1338 3 31674198 31675376 Pvu3g1338 3 31674198 31675376 ECH
Pvu3g1338 3 31674198 31675376 Pvu9g2327 9 33366692 33368093 PCT