Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1309 ATGTTTAGATTAAAGAATTGTGAAGGGCCTTTGCGGTTCTTGTATCAGCAAACTCGGCATCACCCTCACCGCAACAATCTTATGGCTTATTTAGTAGGTTTTGATCCTTGCTCCCACTTGAGCAGGGCCTTTTCGCCGTACCCTTCTCTTTCTTCTTCTGATCGTGGTTGCTACCTGCCTTTCCCTCTTCTCCATTATGCTAATGTCGGGGTTAGAAGAAGCATTGGTTTTGGTCGTAGAGGTTGTAGCTTTGATACTAGTTGTAGTTGTGGTGGTAATGGTGATAGGAAGTTTGTGAGGGCTAAGGCAAGGTCCCTTCGCTTTGCATCGAATCGTCGCCAGCCGATGTTGGCTGATCCGGAGCAAAGGAATTCTGTTAAGAGTGATGAATCTGATGCTACTTTGGTCAAGATTGATAATGGATCTATAAATGGAAGTGCTGTTAAACCCCCTTGTTTCAATGATCACCGATTGTCCCAGAAACTTGTTGTTGCTGTTGATGTTGATGAGGTATTAGGAAACTTCGTGTCAGCTCTCAACAAGTTCATTGCAGATCGATATTCATCAAATTATTCAGTTTCTGAATATCATGTGTACGAGTTTTGCAAGATATGGAATTGTTCACGTGATGAAGCTGATATCCGTGTTCATGAATTTTTTAAGACACCATATTTCAAGTCAGGGATCCACCCTCTTCCAGGTGCTCATACGGCTCTACAGAAGTTATCAAGATTTTGTAGCCTATCAGTTGTAACTTCACGGCAGAATGTGATTAAGGATCACACAATCGGGTGGATAGAGAAGAATTTTCCTGGACTGTTTCATGAGATTCACTTTGGTAACCACTTTGCTCTTGATGGTGTGTCAAGACCAAAGTCAGAAATTTGTAGGTCCTTAAATGCCAAGGTTCTTATTGATGATAACCCGCGATATGCCTTAGAGTGTGCTAATGTTGGAATTAGAGTCCTGCTTTTTGATTATGAAAATTCATATCCTTGGTGCAAGAGTGAATCTACCGAAGAGCACCCTCTGGTGACCAAAGTTAAGAACTGGGAAGAAGTGGAACAACAATTAATGTCATTGATTGCTTCTTAG 1095 0.4164 MFRLKNCEGPLRFLYQQTRHHPHRNNLMAYLVGFDPCSHLSRAFSPYPSLSSSDRGCYLPFPLLHYANVGVRRSIGFGRRGCSFDTSCSCGGNGDRKFVRAKARSLRFASNRRQPMLADPEQRNSVKSDESDATLVKIDNGSINGSAVKPPCFNDHRLSQKLVVAVDVDEVLGNFVSALNKFIADRYSSNYSVSEYHVYEFCKIWNCSRDEADIRVHEFFKTPYFKSGIHPLPGAHTALQKLSRFCSLSVVTSRQNVIKDHTIGWIEKNFPGLFHEIHFGNHFALDGVSRPKSEICRSLNAKVLIDDNPRYALECANVGIRVLLFDYENSYPWCKSESTEEHPLVTKVKNWEEVEQQLMSLIAS* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1309 364 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 162 358 IPR010708 GO:0008253|GO:0009264
Pvu3g1309 364 Gene3D - 197 361 IPR023214 -
Pvu3g1309 364 PANTHER NUCLEOTIDASE YQFW-RELATED 69 363 - -
Pvu3g1309 364 SUPERFAMILY HAD-like 156 359 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1309 Pvu-Chr3 30781093 30785438 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1309 - - gmx:100793947 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1309 3 30781093 30785438 Pvu3g1309 3 30781093 30785438 ECH
Pvu3g1309 3 30781093 30785438 Pvu9g2291 9 32880012 32884807 PCT