Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1274 ATGAAGCAAAAAACGCCATCTTCACCAATCACTGCAAGAACTGTGTTGAAGAAGCAAGGTGACAGCAACAAGTCCCTGCAGAGTCCACCGCAGCCACGCCTCAGAGCTTCTCCCAAGGCTCCAAAGTCACCACCAGAGCCATCAACCAGAGCCAAGTCAGTGCCCACGGACTTGAAGGACGTTTCAAGGGCCAAGAGGGGTGCTGTTGTGAGGTCTCAAAAGGGTCGGGAGGCTGAGGAGGCTAAGGTTGTCGTTGTTGCTCGGTCACGGCGAAGGCTTGGGGATTTTGATTTGAAGAAGAGTGAAGATGATGACCCTGATGGGAAGAAGAGGAAGGAGTTGCAGGAAAAGCTTGAGGTGAGCGACAATTTGATCAAGAGTTTGCAATCTGAGGTGCTGGCGTTGAAGGAGGAATTGGATAAAGTTAAGAGCTTGAATGTGGAGCTTGAGTCTCAGAACACAAAGCTCACTCGGAACCTTGCCGCTGCTGAAGCTAAGGAAGCTACTGTTGGCATTGGCAACAGTGGAAAGGAGTCAATAGGAGAACACCAGAGTCCCAAGTTTAAAGACATACAAAAACTCATTGCTGACAAATTGGAACTGTCTAGAGTGAAAAAGGAAGGTGCTCCTGAAGTTAATTTTGCTAAAGCATCAATTCCTTCACCAACCCCGAGTTTTTCCATTTATGAAACTATAAGTATAGGAAGAAAATCTCCACCCAATTCATGCCTGCAGCCACTTCCACCACCACCACCACCAATTACGAGTTTAGGAAGAAATTCTGCACCGAGAACATGCCTGCAGCCCCCTCCGCCACCTCCACCGCCTCCAATTCCATCTCGGCCTTCAGCAAGATTATCTAACACCCAAAAGGCCCCTGCAGTTGTTGAACTATTTCAGTCCTTAAACAACAAAAATGGAAAGATAGACTCAAAAGGACCAGTGAATCATCCGAGACCAGTAGTTATTAGTGCACACAGTAGCATTGTGGGAGAAATTCAAAACCGTTCAGCTCATCTCTTAGCAATAAGGGCAGATATTGAAACAAAAGGAGAGTTCGTTAATGACCTCATAAAGAAAGTAGTAGATGCAGCATTCACGGATATTGAAGAGGTCTTAAAGTTTGTTAACTGGCTTGATGGAAAACTATCATCATTGGCTGATGAGCGTGCCGTCTTGAAGCATTTTAAGTGGCCTGAGAAGAAAGCTGATGCAATGAGAGAGGCTGCAGTTGAGTATCATGAACTTAAAATGTTAGAACAGGAAATTTCCTCCTACAAGGATGATCCTGACATTCCATGTGGGGCTGCGTTAAAAAAGATGGGCAGCCTATTAGACAAGTCTGAGAGAATCATACAGAGGCTAATCAAGCTACGAAGTTCAGTAATACATTCATATCAAGTGTACAACATTCCAACTGCATGGATGCTTGATTCTGGAATAATGAAGAATATAAAGCAGGCTTCCATGACCCTGGTCAAAATGTACATGAAAAGAGTGACCATGGAACTTGAATCCATTCGCAATTCTGACAGAGAATCTATTCAAGATTCTCTTCTGCTTCAGGGTGTGCATTTTGCATACAGAGCTCATCAGTTTGCTGGAGGATTGGACGCAGAAACAATGTGTGCTTTTGAAGAGATGCGACAACGTGTACCAGGACACCTAGCAGGGTCTCGAGAACTTTTGGTTGGCATACCATAA 1704 0.4489 MKQKTPSSPITARTVLKKQGDSNKSLQSPPQPRLRASPKAPKSPPEPSTRAKSVPTDLKDVSRAKRGAVVRSQKGREAEEAKVVVVARSRRRLGDFDLKKSEDDDPDGKKRKELQEKLEVSDNLIKSLQSEVLALKEELDKVKSLNVELESQNTKLTRNLAAAEAKEATVGIGNSGKESIGEHQSPKFKDIQKLIADKLELSRVKKEGAPEVNFAKASIPSPTPSFSIYETISIGRKSPPNSCLQPLPPPPPPITSLGRNSAPRTCLQPPPPPPPPPIPSRPSARLSNTQKAPAVVELFQSLNNKNGKIDSKGPVNHPRPVVISAHSSIVGEIQNRSAHLLAIRADIETKGEFVNDLIKKVVDAAFTDIEEVLKFVNWLDGKLSSLADERAVLKHFKWPEKKADAMREAAVEYHELKMLEQEISSYKDDPDIPCGAALKKMGSLLDKSERIIQRLIKLRSSVIHSYQVYNIPTAWMLDSGIMKNIKQASMTLVKMYMKRVTMELESIRNSDRESIQDSLLLQGVHFAYRAHQFAGGLDAETMCAFEEMRQRVPGHLAGSRELLVGIP* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1274 567 PANTHER F11A17.16 1 254 - -
Pvu3g1274 567 PANTHER F11A17.16 259 567 - -
Pvu3g1274 567 MobiDBLite consensus disorder prediction 56 82 - -
Pvu3g1274 567 MobiDBLite consensus disorder prediction 265 282 - -
Pvu3g1274 567 MobiDBLite consensus disorder prediction 94 115 - -
Pvu3g1274 567 Coils Coil 111 166 - -
Pvu3g1274 567 MobiDBLite consensus disorder prediction 1 32 - -
Pvu3g1274 567 MobiDBLite consensus disorder prediction 242 257 - -
Pvu3g1274 567 Coils Coil 402 422 - -
Pvu3g1274 567 MobiDBLite consensus disorder prediction 239 290 - -
Pvu3g1274 567 MobiDBLite consensus disorder prediction 1 82 - -
Pvu3g1274 567 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 259 567 IPR040265 -
Pvu3g1274 567 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 254 IPR040265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1274 Pvu-Chr3 30231304 30239216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1274 - - var:108323771 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1274 3 30231304 30239216 Pvu3g1274 3 30231304 30239216 ECH
Pvu3g1274 3 30231304 30239216 Pvu9g2277 9 32715092 32723105 PCT