Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1268 ATGTACTCCACGGACCTTTTGGGCTTCTTCGCCGTCCACGGCGGCGATGCTACGCCGGCAGTGGCTCCCACCACCCCCAGCAACAACAAGTGCTTCAAGATTGCAGCTTTCACCAGACCAACTTCCCATAACCGCGTGAATTTGAAGTCAGACAAGGCTTTGACGCCTTGTTGCTACAGCGCTGACTCAAACACTGACGTTTTCTCTGTGACGTCGTCGAACAAGTCCGACGTGGACTACCTTGGGGAGAGCACCAAAGGTGATTTGAACGTCAAGTCGGAGCATCTTGAGGCTTTCGGAATTGATGGTCATGGTGCTTTAGAAGGTCCAATTGAGGAAGTGGCCAGATCAGAAGCAAGACAAGCAGAGGATTTGCTAAAAGATTTGGGCATTCCGAGCCCTTCTTCATCCAGAGAGTCGCCTCGCGGAATATTCTGCAGCCGTACATTGAATCTGCGGTCCATCAGTGCCATTGGATATGACATGGACTATACCTTGATTCATTATAACGTGGTGGCTTGGGAAGGCAGGGCTTATGACTACTGTATGGAAAACCTTAGGAACATGGGTTTCCCTGTTGATGGACTTGCCTTTGATCCTGACCTGGTTATTAGAGGCCTTGTCATAGACAAAGAGAAAGGAAATTTGGTTAAAGCTGATCGATTTGGTTACATAAAAAGAGCCATGCATGGCACCAAAATGTTATCTACTCGAGCTGTGAGTGAGATGTATGGGAGAGAACTGGTGGACCTGCGAAAGGAGAGTCGATGGGAGTTTCTCAATACACTGTTTTCTGTGTCTGAAGCTGTGGCCTACATGCAGATGGTTGACAGATTGGATGATGGGACTATACCATCAGATCTTGGCCCTCTCGATTATAAAGGACTATATAAGGCTGTTGGAAAAGCTCTTTTCTGGGCACATGTAGAAGGTCGCCTTAAGAGCGAGATCATGTCTAAGCCTGAACTTTTTGTAGAGCCTGATCCAGAATTACCTTTGGCGCTTTTGGATCAGAAGGAGGCTGGTAAAAAACTTCTGCTAATTACCAACTCAGATTATCATTACACAGACAAAATGATGCGTCATTCTTTTAATAGATTCCTTCCCAATGATCTGGGTTGGCGAGATCTATTTGACATTGTAATTGTCTCAGCAAGAAAACCAGAGTTCTTCCAAACATCACACCCCATGTATGAAGTGGTCACAGGCGACGGTCTTATGAGGCCATGCCTCAAGGCTCAAACTGGTGGTTTGTATTCAGGGGGGAGTGCGCAAATGGTTGAAAATTCTCTAGGTGTTCATGGAGATGAGATATTGTATGTTGGCGACCATATTTACACTGATGTCAGTCAATCCAAAGTCCATTTGCGGTGGCGAACAGCATTGATTTGTCGAGAACTGGAAGAAGAGTACAATGCCTTGATTGGTAGCCGGAGTTATAGAGAATCATTGGTGGAGCTTATAAATCAAAAGGAGGTTGTAGGGGATCTCTTTAACCAACTTCGGCTGGCTCTGCAGAGGCGAAATAGAGACCGTCCTGCTCAGACCCTTGCAGCAACTAACATGAATGATGAAGACCTCACCGATAGCATGCAAAAGCTACTTATTGTTATGCAAAGACTGGATAAGAAAATTGCTCCAATGCTGGAGGCTGACGGGGAGCTCTTCAATTCAAGGTGGGGTTTTCTATCTCGTGCTGGACTGTGGGATAAAAGCCACTTGATGAGACAAATTGAGAAATATGCCGACATATACACATCTAGGGTGTCAAACTTTCTGCATTATACGCCCTTCATGTATTTCCGCTCTCAGGAACAGAACCTTGCGCATGACTCGTACACATACTATTGTTCACAACTTAATAATGAGCATTCTTCCTAG 1881 0.4567 MYSTDLLGFFAVHGGDATPAVAPTTPSNNKCFKIAAFTRPTSHNRVNLKSDKALTPCCYSADSNTDVFSVTSSNKSDVDYLGESTKGDLNVKSEHLEAFGIDGHGALEGPIEEVARSEARQAEDLLKDLGIPSPSSSRESPRGIFCSRTLNLRSISAIGYDMDYTLIHYNVVAWEGRAYDYCMENLRNMGFPVDGLAFDPDLVIRGLVIDKEKGNLVKADRFGYIKRAMHGTKMLSTRAVSEMYGRELVDLRKESRWEFLNTLFSVSEAVAYMQMVDRLDDGTIPSDLGPLDYKGLYKAVGKALFWAHVEGRLKSEIMSKPELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMRHSFNRFLPNDLGWRDLFDIVIVSARKPEFFQTSHPMYEVVTGDGLMRPCLKAQTGGLYSGGSAQMVENSLGVHGDEILYVGDHIYTDVSQSKVHLRWRTALICRELEEEYNALIGSRSYRESLVELINQKEVVGDLFNQLRLALQRRNRDRPAQTLAATNMNDEDLTDSMQKLLIVMQRLDKKIAPMLEADGELFNSRWGFLSRAGLWDKSHLMRQIEKYADIYTSRVSNFLHYTPFMYFRSQEQNLAHDSYTYYCSQLNNEHSS* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1268 626 Gene3D - 307 494 IPR023214 -
Pvu3g1268 626 CDD HAD_cN-II 145 467 - -
Pvu3g1268 626 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 144 484 IPR008380 -
Pvu3g1268 626 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 63 619 IPR008380 -
Pvu3g1268 626 Pfam 5' nucleotidase family 144 612 IPR008380 -
Pvu3g1268 626 SUPERFAMILY HAD-like 141 613 IPR036412 -
Pvu3g1268 626 PANTHER HAD-SUPERFAMILY HYDROLASE, SUBFAMILY IG, 5'-NUCLEOTIDASE 63 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1268 Pvu-Chr3 30121785 30129263 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1268 - - vun:114174902 1147.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1268 3 30121785 30129263 Pvu3g1268 3 30121785 30129263 ECH
Pvu3g1268 3 30121785 30129263 Pvu9g2275 9 32690595 32693137 PCT