LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu3g1237	ATGCAAAAGAGCGGGTGCGCAAAACTAGGGTTTCTGTTCAAGAACTGCGAAGCACCTTCAGCTGCATTGACCATGGCGGAAGACCTTACTCAGATCGCTCACTTGCTCAACAGCACCCTCAGCCCCGACGTCGCCGCCGTCCGTGCCGCCACCGACTTGCTCGACCGCCTCTCCGTCAATCCGCACTTCCCTTTCCACCTTCTCACCCTCTCCACCGGAGCAGAAAGTCAAGGCCAGAAAATTGCCGCTGCTACCTACCTCAAAAATCTCACTCGCCGTAATGTCAATAGCTCCGGCGAAAAGCCTTCGAACGTGAGCAAGGAGTTTAAGGAGCAGCTGATGCAGGTTCTGCTTCAAGTCGAGTTCTCCGTTCTCAAGATTCTTGTTGAAGTGTTACGCCCCATTGTGATAGCTGATTTTGTTAAGCAGAATTTGTGGCCCGAGCTTGTGCCTAATTTGCAATCTGCTATTCAGAATAGTCATCTTATCAGCTGTTCAAACACTAAATGGAATACTGTAAATGCACTTATTGTTCTCCATGCTCTTCTTAGACCTTTCCAGTATTTTTTGAATCCTAAAGTAGCCAAGGAGCCAGTACCGCCACAGTTGGAGCTTATATCCAAAGAAATTCTTGTGCCCTTGCTTACTGTTTTCCATCAATTTGTGGAAAAGGCTTTAATAACCTATGAGAGAGCGGAAAAAGAAACTGAGAAAGTCCTTCTCACTATATGCAAATGCCTACATTTTGCAGTGAAGTCCTACATGCCATCGACATTGGCTCCTCTACTGCCTTCATTCTGTCGGGACCTAATGAGCATTTTGAGTTCTCTGAGTTTTGATTGTGCAGTCACTCAAGATGATGAATATTTGACTAGATTGAAGACTGGAAAAAGAAGTCTGCTTATTTTCTCTGCCCTTGTCACCCGGCATAGGAAACATTCTGATAAGTTGATGCCAGAAATTATTAACTGTGTTTTAAACATAGTCAAGTTTAGCAAAAATACCAGTCAACTTCCTTTCCTGTCAGAGAGGCTTATGTCCCTAGGTTTTGATGTAATTTCAAATATACTAGAGACTGGGCCGGGATGGCGGTTAGTTTCTCCACATTTTACAACTCTATTGGAATCTGCAATATTTCCAGCATTAGTAATGAATGATAAGGACATGTCAGAGTGGGAAGAAGACCCAGATGAGTATATACGGAAGAATCTTCCTTCAGATATAGATGAAATTTGTGGATGGAGAGAGGATTTATTCACAGCCAGAAAAAGTGCAGTAAACTTACTTGGTGTTATTTCGATGTCAAAGGGTCCACCAATGGAGACGCCCACCAACAGTTTATCAGCTTCATCCAAGCGTAAAAAAGGTCAAAAGAACAAAAAAAGCAATCAACGCCGCTCTATGGGGGAGTTATTGGTGCTTCCATTTTTGTCCAAGTTTCCCATTCCTTCTGATTCCAATTTGTCTACGAAAATATTGAATGATTACTTTGGTGTTCTTATGGCTTATGGTGGCCTGCAAGATTTTTTGAGGGAGCAAGAACCTGAATTTGTAACAACCCTTGTTCGAACACGGATTTTGCCACTGTACACTGTAGCTGTGTCCCTACCATTTCTTGTTGCAAGTGCAAACTGGATACTTGGAGAACTAGGCTCCTGTCTACCAGAAGAGATGTGTACTGATGTATATTCTCAGTTGCTTATGGCATTGGTCATGCCAGATAGTCGGGGCCCTTCTTGCTATCCAGTGCGGATTTCTGCTGCTGGGGCAATTACCACACTACTTGATAATGACTACATGCCACCCGACTTTCTACCCGTTCTCCAAGTAATAGTCGGTAGCATTGGAAAGGATGAGAGTGAGAGTTCCATCTTATTTCAGCTTCTCAGTTCTATTATGGAAGCTGGAGATGAAAAAGTTGCAGTCCATATTCCACATATTGTGTCCTCAATAGTGGGTTCAGTCTCAAAATGCTTAACTGTCAATATGGAGCCATGGCCTCAAGTGGTTGAACGTGCAATTGCTGCTCTGGCAGTTATGGGTCAGACTTGGGAAAATTCGAGGCCTGAAGAATCTGAGGCTCTTGATAAATGGACCATGGATCACGTGACAATTGCTAGAGCTTTTGCTACACTCTTGCAGCAGGCTTGGCTTACCCCTCTATGCACACTGGATCAAGAAGACGAACAGCAAGCTCCCCCCTCATCATGCGTAGAAAATTTGTCAACTTTGCTACAGTCTGTGTTGCTATCAATTGATGGAAATCACATGATTCAAGAGCTCAAAGTATCAGAGATGGTGTCAGTTTGGGCTGAAATGATTGCAGAGTGGCATGCATGGGAGGAATCAGAGGATTTATCAATTTTTGAGGTGATTAAGGAAATTGTAAATATAGATCGCAGATATAGGCTGAACAACTTTATTGTAAAAGATATGCCACCCCCTCCAGCTCCACCTGTTCCTGAACGTTCAATTGTAGAAGGCATTGGGGCTTTCATCACTGAGGCAATTAAGCAATATCCTTCTGCAACATTTAGAGCTTGCTCATGTGTCCATATATTACTACATTGTCCAACCTACTCACCTGAAACTGAAGGTGTTAGGCAGTCATTAGCTATTGCTTTTAGTCAAGCAGCCTTCTCTCGCATGCTGGAGGTTCAAAGCACACCCGGTGCTCTTTGGAAGCCCTTATTGCTTGCTATATCTTCATGCTATTTGTGTTATCCTGATATTGTAGAAGGTATCCTGGAAAAAGGTAAACATGGAGGTATCACAATTTGGGCTTCTGCTCTGTGCCATGTATCCAGTAGATCTTCTGAGCCTGGTCTGACGGCCGAGTTGGAGATGAAGTTAACTGTCTTGACATTGGCCCGATTGATTGAGCAACTTCTCAAACAAGGGAAGTCAGGTGATGACATTCAGAATTGCTTTACTTCACTGATGGAGGTATCCATACGATTGAAAGAAGTACGTGATGGGAAAGATGAGCATGGTACTGATGACGCTGAAGATGACAGTGACAATGATGAGGATGAGGATGATGACACTGACAATGATGATTATGATGAGGACTCTGGGACCGAGGAATATGAAGAAACAGAAGAAGAATTTCTTAACAGGTATGCTAAAGCTGCTGAGGCTTTGGAAAGTGGTTCAGCTATTGAAGAGGGGGATGATGAAGACCAGGAATTAGAGCTGGAAATAGGTCAATTAGTGGACATTGATGAACAAATGGTAATATTATCCTTGATCGACAAGTACCATCATGTGCTAGTACGAGGACTGATTTTGCCATCGGAGCTCGTCGTTAATTTTCTGAATGCCTTCCCGGTGTACGCGTCTTACTTCAATCAATACAGATAG	3363	0.4338	MQKSGCAKLGFLFKNCEAPSAALTMAEDLTQIAHLLNSTLSPDVAAVRAATDLLDRLSVNPHFPFHLLTLSTGAESQGQKIAAATYLKNLTRRNVNSSGEKPSNVSKEFKEQLMQVLLQVEFSVLKILVEVLRPIVIADFVKQNLWPELVPNLQSAIQNSHLISCSNTKWNTVNALIVLHALLRPFQYFLNPKVAKEPVPPQLELISKEILVPLLTVFHQFVEKALITYERAEKETEKVLLTICKCLHFAVKSYMPSTLAPLLPSFCRDLMSILSSLSFDCAVTQDDEYLTRLKTGKRSLLIFSALVTRHRKHSDKLMPEIINCVLNIVKFSKNTSQLPFLSERLMSLGFDVISNILETGPGWRLVSPHFTTLLESAIFPALVMNDKDMSEWEEDPDEYIRKNLPSDIDEICGWREDLFTARKSAVNLLGVISMSKGPPMETPTNSLSASSKRKKGQKNKKSNQRRSMGELLVLPFLSKFPIPSDSNLSTKILNDYFGVLMAYGGLQDFLREQEPEFVTTLVRTRILPLYTVAVSLPFLVASANWILGELGSCLPEEMCTDVYSQLLMALVMPDSRGPSCYPVRISAAGAITTLLDNDYMPPDFLPVLQVIVGSIGKDESESSILFQLLSSIMEAGDEKVAVHIPHIVSSIVGSVSKCLTVNMEPWPQVVERAIAALAVMGQTWENSRPEESEALDKWTMDHVTIARAFATLLQQAWLTPLCTLDQEDEQQAPPSSCVENLSTLLQSVLLSIDGNHMIQELKVSEMVSVWAEMIAEWHAWEESEDLSIFEVIKEIVNIDRRYRLNNFIVKDMPPPPAPPVPERSIVEGIGAFITEAIKQYPSATFRACSCVHILLHCPTYSPETEGVRQSLAIAFSQAAFSRMLEVQSTPGALWKPLLLAISSCYLCYPDIVEGILEKGKHGGITIWASALCHVSSRSSEPGLTAELEMKLTVLTLARLIEQLLKQGKSGDDIQNCFTSLMEVSIRLKEVRDGKDEHGTDDAEDDSDNDEDEDDDTDNDDYDEDSGTEEYEETEEEFLNRYAKAAEALESGSAIEEGDDEDQELELEIGQLVDIDEQMVILSLIDKYHHVLVRGLILPSELVVNFLNAFPVYASYFNQYR*	1121

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu3g1237	1120	Gene3D	-	26	1058	IPR011989	-
	Pvu3g1237	1120	MobiDBLite	consensus disorder prediction	991	1035	-	-
	Pvu3g1237	1120	SUPERFAMILY	ARM repeat	25	1037	IPR016024	-
	Pvu3g1237	1120	MobiDBLite	consensus disorder prediction	437	465	-	-
	Pvu3g1237	1120	MobiDBLite	consensus disorder prediction	999	1035	-	-
	Pvu3g1237	1120	ProSiteProfiles	Importin-beta N-terminal domain profile.	50	123	IPR001494	GO:0006886\|GO:0031267
	Pvu3g1237	1120	MobiDBLite	consensus disorder prediction	438	452	-	-
	Pvu3g1237	1120	PANTHER	IMPORTIN-7, 8, 11	28	1118	-	-
	Pvu3g1237	1120	PANTHER	ARM REPEAT SUPERFAMILY PROTEIN	28	1118	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu3g1237	-		-	gmx:100782006	1806.96

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu3g1237	3	29786296	29795518	Pvu3g1237	3	29786296	29795518	ECH