Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1221 ATGCTTATCCTCAGTCCTGTTACTCCCGGTCAGGTCTCGTTCTTGCTCGGGATCACTCCGGTCGTTGTGGCATGGATATATTCGGAGATATTGGAGTATCGGAAAAACTCTGTCTCGTCCAAAGCTGGTCACTCGGACATCAACTTAGTTGAAATGGGTAGTGATGCTGTTAAAGACGAAGACAAAGCAGTTTTATTGGAGGGAGGAGCTCTACAGTCAGGATCCCCGAGGGCGCGGAGCTTAACTGCCTCACCATCAATTATCCGATTCCTTTTGATGGATAACTATTTCCTTCTTGAAAACCGTTTGACGCTTAGAGCGATGTCGGAATTTGGTCTCCTTCTGGCTTACTTTTATCTGTGTGACCGCACGGATTTCTTTGCCTCGTCAAAAAAGAGTTACAATAGGGATATCTTCCTATTTCTCTATTTTCTCCTCATCATAGTTTCGGCAATGACTTCCTTTAAGATACATCAAGACAAGTCACCTTTTTCTGGTAAATCCATCCTTTATTTAAATAGACACCAGACTGAAGAATGGAAAGGCTGGATGCAGGTTTTGTTTTTAATGTACCATTACTTTGCTGCATCTGAAATATACAATGCAATCCGTTTGTTCATCGCTGCATATGTTTGGATGACTGGATTTGGGAACTTCTCATATTATTATGTTCGTAAAGATTTTAGTCTGGCCAGATTTGCTCAGATGATGTGGAGGCTTAATTTCTTTGTGGTGTTCTGTTGTATTGTACTGAACAACAGTTACATGTTATACTACATCTGCCCTATGCATACACTTTTCACTCTTATGGTTTATGGGGCACTTGGTATTCTCAACAAGTACAATGAGATTGGGTCAGTCATTGCTGTGAAAATCATTGCTTGCTTCTTGGTTGTTATCTTGGTATGGGAGATACCTGGAGTCTTCGAATTGCTTTGGAGTCCATTCACTTTCTTTCTCGGTTATACCGATCCAAATCCTGCCAAATCACATCTTTCCCGCTTGCATGAATGGCATTTTCGCTCAGGGCTTGATCGCTACATCTGGATAATTGGCATGATTTATGCTTATTATCATCCAACTGTTGAACGATGGATGGAAAAATTGGAGGAAGCTGAAATCAAGCGCAGAATATCAATCAAAGCAACTATAGTGCTGATATGCTCGTTGGTGGGTTATTTATGGTTTGAGCATATATACAAGCTGGACAAGCTTACATACAATACATACCATCCTTATACCTCGTGGATTCCCATAACGGTTTACATATGCTTGCGGAATGTTACACAAAGTTTCCGTAGCTATACACTGACACTTTTTGCATGGCTCGGGAAGATAACACTTGAGACTTACATCTCCCAGATCCATATCTGGTTAAGGTCAGGTGTTCCAGACGGACAACCCAAATTGTTGCTTTCCCTGATCCCAGACTACCCAATGTTGAACTTCATGCTTACTACTTCCATATATGTTGCAATTTCCTGTAGGCTTTTTGACCTGACAAATACACTCAAGGTGGCATTCGTGCCCAGCAAAGACGACAAGCGTCTTGTACACAATTTAATTACAGCAACAACAATCTCAGTTGTTTTATATTCTTTGTCCTTTGGCTTCCTTAGGTTACCTCAAATGTTGGTTTGA 1641 0.4113 MLILSPVTPGQVSFLLGITPVVVAWIYSEILEYRKNSVSSKAGHSDINLVEMGSDAVKDEDKAVLLEGGALQSGSPRARSLTASPSIIRFLLMDNYFLLENRLTLRAMSEFGLLLAYFYLCDRTDFFASSKKSYNRDIFLFLYFLLIIVSAMTSFKIHQDKSPFSGKSILYLNRHQTEEWKGWMQVLFLMYHYFAASEIYNAIRLFIAAYVWMTGFGNFSYYYVRKDFSLARFAQMMWRLNFFVVFCCIVLNNSYMLYYICPMHTLFTLMVYGALGILNKYNEIGSVIAVKIIACFLVVILVWEIPGVFELLWSPFTFFLGYTDPNPAKSHLSRLHEWHFRSGLDRYIWIIGMIYAYYHPTVERWMEKLEEAEIKRRISIKATIVLICSLVGYLWFEHIYKLDKLTYNTYHPYTSWIPITVYICLRNVTQSFRSYTLTLFAWLGKITLETYISQIHIWLRSGVPDGQPKLLLSLIPDYPMLNFMLTTSIYVAISCRLFDLTNTLKVAFVPSKDDKRLVHNLITATTISVVLYSLSFGFLRLPQMLV* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1221 546 PANTHER PROTEIN REDUCED WALL ACETYLATION 2 7 542 - -
Pvu3g1221 546 Pfam 10 TM Acyl Transferase domain found in Cas1p 104 519 IPR012419 -
Pvu3g1221 546 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 7 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1221 Pvu-Chr3 29374518 29380656 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1221 K03377 - gmx:100794337 1047.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1221 3 29374518 29380656 Pvu3g1221 3 29374518 29380656 ECH