Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1217 ATGGCAAACTTGAAAGCAGTGATTCTATGTTTGTTTCTCGAAGCCATCGTTGTTATGAATACAATACCAGGAAACGAGTGCAGAAGCTTCCATCCAAACGATGAAAGTCTGATAGAGAGCACTTGCAAGAAGACCCCCAACTACAATCTTTGCCTTCAATATCTCAAGGCAAGCCCTGGAAGCTCCACTGCTGATGTCAGAGGGCTGGCTCTTATCATGGTAAACGTGATCAAAGCCAAAGCATATGATACCTTGAAAATAATCCATGACTTGCAAAAGAAGGGAGGAGGACCTAAGCAGCAAGAAGCCCTCAGTTCTTGTGCTAGTAAATACAACACAGTGTTGGTAGCTGATGTTGCACAAGCCACTGAGGCTCTGCTGAAAGGGAACCCCAAGTTTGCTGAAAATGGGGCTAATGATGCTGCCAATGAGGCTACCTATTGTGAGAGTGACTTCTCTGGGAATTCTCCACTCACAAAACAGAACAATGCTATGCACGATGTTGCTGCTGTTACAGCTGCCATTGTTAGATTGCTGCTCTAG 543 0.4494 MANLKAVILCLFLEAIVVMNTIPGNECRSFHPNDESLIESTCKKTPNYNLCLQYLKASPGSSTADVRGLALIMVNVIKAKAYDTLKIIHDLQKKGGGPKQQEALSSCASKYNTVLVADVAQATEALLKGNPKFAENGANDAANEATYCESDFSGNSPLTKQNNAMHDVAAVTAAIVRLLL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1217 180 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 179 IPR035513 -
Pvu3g1217 180 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 21 180 - -
Pvu3g1217 180 Pfam Plant invertase/pectin methylesterase inhibitor 36 175 IPR006501 GO:0004857
Pvu3g1217 180 CDD CIF_like 35 179 IPR034087 GO:0004857|GO:0043086
Pvu3g1217 180 PANTHER PECTINESTERASE INHIBITOR-LIKE 21 180 - -
Pvu3g1217 180 SMART PMEI_2 33 175 IPR006501 GO:0004857
Pvu3g1217 180 TIGRFAM PME_inhib: pectinesterase inhibitor domain 12 179 IPR006501 GO:0004857
Pvu3g1217 180 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 180 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1217 Pvu-Chr3 29248388 29248930 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1217 - - pvu:PHAVU_003G117200g 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1217 3 29248388 29248930 Pvu3g1217 3 29248388 29248930 ECH