Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1215 ATGAGGAGGAACCAAGCTACTGTTGTGAGCAATCTCTTTGAAAAAATCACAATGGCAAACTTGAAAGCAGTGATTCTATGTTTGTTTCTCCAAGCCATTGTTGTTATGAATACAATACCAGGAAGCGAGTGCAGAAGCTTCCATCCAAACGATGAAAGTCTGATAGAGAGCACTTGCAAGAAGACTCCCAACTACAATCTTTGCCTTCAATATCTCAAGGCAAGCCCTGGAAGCTCCACTGCTGATGTCAGAGGGCTGGCTCTTATCATGGTAAACGTGATCAAAGCCAAAGCATATGATACCTTGAAAATAATCCATGACTTGCAAAAGAAGGGAGGAGGAGCTAAGCAGCAAGAAGTCCTCAGTTCTTGTGCTAGTAGATACCACACAGTGTTGGTAGCTGATGTTGCACAAGCCACTGAGGCTCTGCAGAAAGGGGACCCCAAGTTTGCTGAAAATGGGGCTAATGATGCTGCCAATGAGGCTACCTATTGTGAGAGTGACTTCTCTGGGAATTCTCCACTCACCAACCAGAACAATGCTATGCACGATGTTGCTGCTGTTACAGCTGCTATTGTTAGATTGCTGCTCTAG 594 0.4478 MRRNQATVVSNLFEKITMANLKAVILCLFLQAIVVMNTIPGSECRSFHPNDESLIESTCKKTPNYNLCLQYLKASPGSSTADVRGLALIMVNVIKAKAYDTLKIIHDLQKKGGGAKQQEVLSSCASRYHTVLVADVAQATEALQKGDPKFAENGANDAANEATYCESDFSGNSPLTNQNNAMHDVAAVTAAIVRLLL* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1215 197 CDD CIF_like 52 196 IPR034087 GO:0004857|GO:0043086
Pvu3g1215 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 35 197 - -
Pvu3g1215 197 SMART PMEI_2 50 192 IPR006501 GO:0004857
Pvu3g1215 197 Pfam Plant invertase/pectin methylesterase inhibitor 53 192 IPR006501 GO:0004857
Pvu3g1215 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 52 196 IPR035513 -
Pvu3g1215 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 50 197 IPR035513 -
Pvu3g1215 197 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 35 197 - -
Pvu3g1215 197 TIGRFAM PME_inhib: pectinesterase inhibitor domain 28 196 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1215 Pvu-Chr3 29216861 29217699 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1215 - - pvu:PHAVU_003G117200g 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1215 3 29216861 29217699 Pvu3g1215 3 29216861 29217699 ECH