Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1209 ATGCATCCGTCAAATAAGGGGTCATCCAGTAATGCTTGTCTTCATGACATGGGGCCACCAATGCTTCCAATATCTGGTGAAATGGCATTGCCTACAAATGCAGTAGAAGACAAGGAAAAGGAAAAGGAGGAACTGACAGAGACTATGAACAAGCTGAATATTGAAGGACCGTCTTCTGGGAATGGACTTCCTAACTTCAGAAGAAAACCTGTCATCATTATTGTTGTTGGAATGGCAGGGAGTGGGAAAACAACACTCATGCATAGGTTGGTTTGCCATACACATATGAGAAACATCCGGGGTTATGTGATGAATCTTGACCCTGCTGTCATGACACTCCCATATGCTGCTAACATTGATATAAGAGACACTGTTAAATACAAAGAAGTCATGAAGCAGTTTAACCTTGGCCCTAATGGTGGAATTTTGACTTCCCTGAACTTGTTTGCCACCAAGTTTGACGAGGTAATTTCTGTAATTGAGAGACGGGCAGATCAACTTGACTATGTTCTTGTAGACACCCCTGGTCAGATTGAAATATTTACCTGGTCTGCTTCTGGTGCTATCATCACAGAAGCTTTTGCATCCACATTTCCCACTGTAGTGGCCTATGTAGTTGATACTCCTCGTTCAGAAGATCCTACAACTTTCATGAGCAATATGTTGTATGCTTGTAGTATCCTCTATAAGACAAAGTTACCTCTCATCTTGACATTCAACAAAGTTGATGTAGCAGCACATCAGTTTGCATTGGAGTGGATGGAGGATTTTGAGACATTCCAAGCAGCAGCAAGTTCAGATCAGTCATACACATCAACTTTAACTCAAAGCCTTTCTCTTGTGCTAGACGAATTCTACAACAATTTGAAATCAGTTGGAGTTTCTGCAGTTTCTGGTGTAGGAATGGAAGCCTTCTTTAAAACTGTAGAAGCCAGTGCAGAGGAATACATGGAAACCTACAAGGCTGATCTTGATAAAAGACGTGAAGAGAAGCAACGTTTGGAGGAAGACCGCAGGAGGGGTGACATGGATAAACTGAGGAGGGACATGGAGAAATCTGGGGGGGAAACAGTAGTTTTGAACACTGGTTTGAAGGACAAAGAGAAAAGTAAAAGTATGATGGATGAGGAAGATGAGGTTGAGGAGATGGATGATGATGATGATGATTTGGAGAGATATACTGAAGATGATGATGCTATAGATGAGGATGAAGATGAAGACGAGGAGGTTGATAAATTCGGCTTCTGA 1248 0.4183 MHPSNKGSSSNACLHDMGPPMLPISGEMALPTNAVEDKEKEKEELTETMNKLNIEGPSSGNGLPNFRRKPVIIIVVGMAGSGKTTLMHRLVCHTHMRNIRGYVMNLDPAVMTLPYAANIDIRDTVKYKEVMKQFNLGPNGGILTSLNLFATKFDEVISVIERRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVAYVVDTPRSEDPTTFMSNMLYACSILYKTKLPLILTFNKVDVAAHQFALEWMEDFETFQAAASSDQSYTSTLTQSLSLVLDEFYNNLKSVGVSAVSGVGMEAFFKTVEASAEEYMETYKADLDKRREEKQRLEEDRRRGDMDKLRRDMEKSGGETVVLNTGLKDKEKSKSMMDEEDEVEEMDDDDDDLERYTEDDDAIDEDEDEDEEVDKFGF* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1209 415 MobiDBLite consensus disorder prediction 362 376 - -
Pvu3g1209 415 PANTHER GPN-LOOP GTPASE 33 408 - -
Pvu3g1209 415 MobiDBLite consensus disorder prediction 329 354 - -
Pvu3g1209 415 PANTHER XPA-BINDING PROTEIN 1-RELATED 33 408 IPR004130 -
Pvu3g1209 415 MobiDBLite consensus disorder prediction 377 415 - -
Pvu3g1209 415 Gene3D - 70 328 IPR027417 -
Pvu3g1209 415 Pfam Conserved hypothetical ATP binding protein 75 313 IPR004130 -
Pvu3g1209 415 Coils Coil 35 55 - -
Pvu3g1209 415 MobiDBLite consensus disorder prediction 329 415 - -
Pvu3g1209 415 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 310 IPR027417 -
Pvu3g1209 415 Coils Coil 317 337 - -
Pvu3g1209 415 CDD GPN1 71 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1209 Pvu-Chr3 29139521 29146063 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1209 K24104 - gmx:100805534 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1209 3 29139521 29146063 Pvu3g1209 3 29139521 29146063 ECH