Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1188 ATGGAAGGTGCAGAGGAAGGAATAGAGAGGGTGGTGGACTCGAAGGACATGCAGCAGCAGACCAAAGCTTTCGACAAGCTCACTGACCGCGTCGAGGATCGCCAACTCGATTCCTCTCGCGTTCAAGAGGCCATGGCATCAATTGCTGCATCTGCTGAAGCTGACTGGCAAGCCATGCGTTTGAGGGAGAAAGAATTAGCTGCTGTTAAGATAAATGCCGCCGATGTCGACATTATCGCTAATGAATTAGAGCTGGATAAAAAGGTGGCTGAAAGGACCTTGCGCGAGCATAAAGGTGATGCTGTTGCTGCAATCCGGCACTTGCTTCGCTAG 333 0.5105 MEGAEEGIERVVDSKDMQQQTKAFDKLTDRVEDRQLDSSRVQEAMASIAASAEADWQAMRLREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRHLLR* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1188 110 CDD UBA_HYPK 69 109 IPR038922 -
Pvu3g1188 110 PANTHER BNAA05G30770D PROTEIN 1 109 - -
Pvu3g1188 110 PANTHER HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER 1 109 - -
Pvu3g1188 110 Coils Coil 80 100 - -
Pvu3g1188 110 Pfam HYPK UBA domain 69 109 IPR044034 -
Pvu3g1188 110 MobiDBLite consensus disorder prediction 1 29 - -
Pvu3g1188 110 Gene3D - 70 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1188 Pvu-Chr3 28614324 28616279 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1188 - - gmx:100789285 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1188 3 28614324 28616279 Pvu3g1188 3 28614324 28616279 ECH
Pvu3g1188 3 28614324 28616279 Pvu6g1239 6 23333192 23337057 PCT