Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1180 ATGGAAACAAGCAGTGACAAATCCAGGGAGCAGTTAAGAAAAATGGATCACAGCCCTATTTCAGCTAAGATAGAAGCAGATAAAGATCTTGTATCATCGATCAAAGAGAGGCTTGAAGCGGTTTCATCTTTGAAATCCATCTTCAGAGTCCCCGAGAAACTCCTAGAAGCAAATGAGAATATGTTCATCCCTGGCAATGTTTCTATTGGTCCTCTCCATCATGGCAAGGATGGTCTCAAATACATGGAAGATCGCAAGTGGCATTACATGTTCACACTGCTGAATCGACAACCAAACCGTCTAGAGTCAAGTTTGCACGAATGTGCGAATGCAATGAGCGATCTAGAGAAGCCAGCACGAAATTTCTATGCAGAAGAACTCAAACTCAGAAGCAACCAGTTCATCGAGATGATGCTAGTTGATGGGTGTTTCATCATTGAGCTTCTCTTGAAATATGCTCTAAAGGGTATAAGACGTCGTGGTGACCCCATATTTGTCACGCCAGGGTTGCTCAATAGAGTGAGGTGTGACCTTATATTGTTAGAAAACCAAATACCCTTTCTCATTCTTCAAAGGTTGTTTCAAATTGTACACATTCAAGTACAACATGACCAGACCCTGACCCTCTCTGAGCTTATCTTTCGTTTCTTCAGAAAAATGTTGCCGGGGGATAGGGAATTTGTGAATGAGAAGTTTAGCCAAGAGGGTTACCATTTGCTTGACCTGATTCGCCAGTGTTACCTTCCAAACTATGCAAGAGTAGTGTCCACGAAAAGTATATCTCAAGGTGATCTTGAGTGTGCAACAAAGCTCAAGAAGGATGGGATTAAGTCCAAGAGATCCAACACCAAGTTCTTACTAAACTTGAAATTTGCAAATGGGGTGCTTCATGTTCCTCCCTTCACACTCCATCATTTCATAGAAATGCTATTTTCCAATATGATAGCATTAGAGCAGCACCAAAATGATAGTCAACCTGTCACATCTTATGCCCTTCTAATGCAAGCCATGGTGTGCACTGAAAAAGATGCCAAGCTGTTCCACAAACTAAGGATACTGATCATGGATAATTACCCTGAGAAAGAAGTTTGTGATCTGTTTAAGAGGCTTTGCAGAAAAGTGGAATATGAGGAGGATAAATTCTACTTTGCAGGGCTAATTGAACAAATTTTTGAGTATAAAAGAGCCCCGAAATCATGGAGGAAGATATTGAAATGCAATTGGCTTAAAACTCGGTTACCTTGGTTGGCTGTCGCTTGTGGAGCCTTATGGAAAATAAGCCGACAAGGAGAATGTGAAGGACGAAATGGTTGTTTCTGCTGGATTAGGAACTGGGAACAAGCCATGAATCAGACACTTTGTAGTGTGAAAGTGGTTATCGATACTTCGGGTAAAGAAAGGATTATCGATAGTGTTTCTTTTGCCTAA 1428 0.4118 METSSDKSREQLRKMDHSPISAKIEADKDLVSSIKERLEAVSSLKSIFRVPEKLLEANENMFIPGNVSIGPLHHGKDGLKYMEDRKWHYMFTLLNRQPNRLESSLHECANAMSDLEKPARNFYAEELKLRSNQFIEMMLVDGCFIIELLLKYALKGIRRRGDPIFVTPGLLNRVRCDLILLENQIPFLILQRLFQIVHIQVQHDQTLTLSELIFRFFRKMLPGDREFVNEKFSQEGYHLLDLIRQCYLPNYARVVSTKSISQGDLECATKLKKDGIKSKRSNTKFLLNLKFANGVLHVPPFTLHHFIEMLFSNMIALEQHQNDSQPVTSYALLMQAMVCTEKDAKLFHKLRILIMDNYPEKEVCDLFKRLCRKVEYEEDKFYFAGLIEQIFEYKRAPKSWRKILKCNWLKTRLPWLAVACGALWKISRQGECEGRNGCFCWIRNWEQAMNQTLCSVKVVIDTSGKERIIDSVSFA* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1180 475 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 10 405 IPR004158 -
Pvu3g1180 475 PANTHER - 10 405 - -
Pvu3g1180 475 Pfam Plant protein of unknown function 47 419 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1180 Pvu-Chr3 28486253 28488448 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1180 - - pvu:PHAVU_003G113700g 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1180 3 28486253 28488448 Pvu3g1180 3 28486253 28488448 ECH