Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1167 ATGGGAGCGCCGGAGAAATCACAGGCTAACACTAATTCGATGCAGCGTGTCAAGGTATATCGACTGAATGATGAAGGGAAATGGGATGACCAGGGTACTGGTCATGTCACTGTTGATTATCTAGAGCGATCAGAAGAGCTGGGCTTATTTGTTTATGATGAAGATGATAATGAGACCATACTTTTGCATCGGATCAGTTCTGATGATATTTATAGGAAACAAGAAGATACAATCATCTCATGGAGAGATCCAGAATATGCTACAGAACTGGCACTTAGTTTTCAAGAGCCTAGTGGTTGCTCTTACATATGGGACCATATTTGCAACGTGCAGAGGAATATGCATTTTAATACATTAAATAGTGAGCCATTTCACAGTGTCAATAGTGAACCAAGGGAGTTGCCTGCTGTTGAGCTGTCAACACTTCCTTTGATTTTAAAGACTGTGGTTGACACTGGCTTTGCAGATCAATTGCGGCTTACAGAACTAATATTAAGTGATCAAGAGTTTTTTCAGAAGCTGATGGAAGTATTCAGAATGTGCGAAGACTTGGAAAATATTGATGGCCTTCACATGATTTTCAAAATAGTCAAAGGGATTGTTTTGCTAAATAGTCCAGCAATTTTTGAGAGAATTTTTAGTGATGACTTTATAGTGGACATTATTGGTGCCCTCGAGTATGATCCAGAGCTTCCCCGTGTTCAACATCATCGGAAATTCTTAAAGGAGCATGTTGTTTTTAAGGAGGCTATACCTATAAAAGATCCTGTTGTGCTGTCAAAGATACATCAGACATATAGAGTTGGTTTTTTGAAGGATGTTGTTCTGGCGAGATTATTGGATGAGGGTATTGGTGCAAATCTTAACTCCATAATACATTCAAACAATGCCTATGTTGTCTCTTCATTGAAGGATGACAGTACATTTATCCAGGAGTTGTTTGCTAGGTTAAAATCAGGCACCACAACTCAAGAATCCAAGAAGAATTTGGTTTATTTCTTGCATGAATTTTGTAGTTTGAGCAAGAGCTTGCAGATGGTCCAGCAGCTTCGGCTTTTTAGGGATCTAATGAATGAAGGCATCTTTGACGTTGTCACCGATGTCTTACAAAGTCAAGACAAGAAGCTTGTGCTAACTGGCACAGATATCCTCATTCTTTTCTTGAATCAAGATCCTAATCTCTTGCGATCCTATTTTGTTCGACAGGAAGGATTTGCTCTTCTAGGACTTTTGGTTAAAGGAATGCTAACAGATTTTGAAGAGAACATGCACTGCCAGTTTCTTGAAATTCTTCGCAATTTATTGGACTCATGCACATTGTCTGGATCTCAGAGGGACACTATTATTGACATATTCTTTGAGAGGCATTTGGGGCAATTGATTGAGGTTATAACAGCATCTTGTCCTTCAGAAAATACTGCTGATGAAAGTGACAAATCAGTAGGTCCTGGGCGAAGTGCTCATCGTCAGGATGGGACAAAGCCGGAGATACTATCAAACATATGTGAATTACTATGCTTTTGTGTCCTACATCATCCTTACAGAATAAAGTGTAACTTTCTTCTCAATAATGTGTTTGAAAAAATATTGCTATTGACCCGGAGAGCAGAAAGATACTTAGTTGTTGGTGCTGTCCGATTTGTTCGAACTATTCTCTCGCGCCATGAAGAGCAATTGATAAATTATGTTATTAGGAATAATGTTCTCAAACCAATCATTGATGCCTTTGTTTCTAACGGCAATCGCTACAATCTGCTCCATTCTGCTGTTCTGGAGCTTTTTGAGTTTATTAGGAAGGAGAATCTGAAAGTATTGCTGAAATACATAGTTGATTGTTTTTGGGATCAGCTGGTGAAATTTGAGTATTTGGCGTCCATTCACTCGCTGAAAGTAAAATATGAGCAGTGTTTGGATAATGGTGGGACAAAAGATGTCGTTACTGTTGTGGACCTTCGTAGACGAAATGATGAGCGTGCTCTGGAGAGAGAAGAAGAACGATACTTTAACGAGGACAGTGATGAGGAGGATATTGCTTCCGCATCTGTTCCCCGGAATCAGAAGGGTCACCAGCAACCTAATCTATCCAATGGAGTTGCTTCAAGCTATTCACAGTTAAGTCCAAGGTCATTGGTTGACTATGAAGATGATGAGGACGATGAAGATTACAAACCACCACCAAGGAAGCAGCCTGAAACTTCGGAGGATGATGATGGGGTATTGGAGTCTCTCAGGCTGAAGAGGAAGTTACCTTCAAAAGATAAGGAACCTGAACTTGTGAAGAAACAGAAGTTATCAAAGAATTCTAAATCTAAAGATAGTGTCTTTGCTGCCTTGTGTTCAACATTGAGCCAAGCTGCTCTACCAAGTAAGAAAACATCAATCAGCATTCAGACAAGTTCTCGAACAGTTGAGGGGAGGATGGGCTCAAGTGAAAATAATCAGGGAGATGTACAAAGTATTTCTAGAAGCAGTTCCGATAATAGCGACATTGCAGGAGAAGAGAATCACATAGAGACAGAGGCTGAAGACTCTAGAAGCTTTTCCGATTGCTTGCATGCAAAATCAGATAATATACAATTGGGTGGAGAGGAACGACCATTGGTTGCCCCAAAGTCCTCACCAGAGATGGCTGTAAATGGATCGTAA 2646 0.4006 MGAPEKSQANTNSMQRVKVYRLNDEGKWDDQGTGHVTVDYLERSEELGLFVYDEDDNETILLHRISSDDIYRKQEDTIISWRDPEYATELALSFQEPSGCSYIWDHICNVQRNMHFNTLNSEPFHSVNSEPRELPAVELSTLPLILKTVVDTGFADQLRLTELILSDQEFFQKLMEVFRMCEDLENIDGLHMIFKIVKGIVLLNSPAIFERIFSDDFIVDIIGALEYDPELPRVQHHRKFLKEHVVFKEAIPIKDPVVLSKIHQTYRVGFLKDVVLARLLDEGIGANLNSIIHSNNAYVVSSLKDDSTFIQELFARLKSGTTTQESKKNLVYFLHEFCSLSKSLQMVQQLRLFRDLMNEGIFDVVTDVLQSQDKKLVLTGTDILILFLNQDPNLLRSYFVRQEGFALLGLLVKGMLTDFEENMHCQFLEILRNLLDSCTLSGSQRDTIIDIFFERHLGQLIEVITASCPSENTADESDKSVGPGRSAHRQDGTKPEILSNICELLCFCVLHHPYRIKCNFLLNNVFEKILLLTRRAERYLVVGAVRFVRTILSRHEEQLINYVIRNNVLKPIIDAFVSNGNRYNLLHSAVLELFEFIRKENLKVLLKYIVDCFWDQLVKFEYLASIHSLKVKYEQCLDNGGTKDVVTVVDLRRRNDERALEREEERYFNEDSDEEDIASASVPRNQKGHQQPNLSNGVASSYSQLSPRSLVDYEDDEDDEDYKPPPRKQPETSEDDDGVLESLRLKRKLPSKDKEPELVKKQKLSKNSKSKDSVFAALCSTLSQAALPSKKTSISIQTSSRTVEGRMGSSENNQGDVQSISRSSSDNSDIAGEENHIETEAEDSRSFSDCLHAKSDNIQLGGEERPLVAPKSSPEMAVNGS* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1167 881 MobiDBLite consensus disorder prediction 786 828 - -
Pvu3g1167 881 MobiDBLite consensus disorder prediction 721 768 - -
Pvu3g1167 881 MobiDBLite consensus disorder prediction 683 708 - -
Pvu3g1167 881 Pfam Phosphatase 4 regulatory subunit 3 168 356 IPR006887 -
Pvu3g1167 881 PANTHER ATP SYNTHASE GAMMA-RELATED 1 818 - -
Pvu3g1167 881 Gene3D - 290 614 IPR011989 -
Pvu3g1167 881 MobiDBLite consensus disorder prediction 662 772 - -
Pvu3g1167 881 MobiDBLite consensus disorder prediction 786 881 - -
Pvu3g1167 881 PANTHER BINDING PROTEIN-RELATED 1 818 - -
Pvu3g1167 881 Gene3D - 10 128 IPR011993 -
Pvu3g1167 881 SUPERFAMILY PH domain-like 15 111 - -
Pvu3g1167 881 SUPERFAMILY ARM repeat 306 620 IPR016024 -
Pvu3g1167 881 MobiDBLite consensus disorder prediction 471 492 - -
Pvu3g1167 881 MobiDBLite consensus disorder prediction 829 850 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1167 Pvu-Chr3 28248985 28266411 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1167 K17491 - gmx:100786790 1570.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1167 3 28248985 28266411 Pvu3g1167 3 28248985 28266411 ECH
Pvu3g1167 3 28248985 28266411 Pvu9g2634 9 36793171 36809465 PCT