Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1156 ATGGATGCCCAAACTTTTGTAGCACTGGTAGTTGGTGTCACAGGGCTTACCGGGCTGAGCCTGGTCCAAGCCCTGAAGCAGCCCAACAGTCCTGGAGGCCCATGGAAAGTTTACGGCGCGGCCCGTAGGACCCCGCCAAGATGGTTCCCTCCTTCCACCATCGACCACTTCATCAGCTTTGACGCTATGGACTCTTCCGACACACGCGCCAAGCTTTTCCCCATTGCAACTGAAGTCACGCACCTGTTCTGGATTACCTTTCAGATTCATGCAGAGGAAGAAGTCAACATCAGAGTCAACAAAACCATGCTCCTCAACGTTCTCACCGCCCTCAAATCTTGCAACTCTTCAAAGCTTGCCCATGTCACGCTCCAAACCGGCACCAAACACTACATGGGTCCAATTTTCGATCCCCTTCATTCCACCCAACTCATCTCCCACGACCCACCCTTTCGTGAGAACATGGCGCGCCTCCCTTACCCCAACTTCTACTACGCGCTCGAAGATCTTGTTGCATCCTACGCGCCGTCGTTGACGTACTCAGTGCACCGCTCCTCTATTATAATAGGAGCGTCATCAAGGAGTGTCCACAACGCGCTGTTCACGCTAGCAGCTTACGCCCTAATCTGTCGCCACACAGGATTGGCGTTTCGGTATCCGGGAACGAAGTACACGTGGGAGCATTTCTGTGACATGACCGACGCCGGAGTGTTGGCGCAGCAGCACGTGTGGGCTGCGGTTACCCCTGAGGCTAAAAATCAGGCCTTCAATTGCACTAACGGCGACGTTTTCACGTGGAAGAGCATCTGGAAGTTACTCTCTGAACTTTTCGATGTGGAGTTCGTGGCGTTTGACGAAACGCAAGCCTTGGATTTGGTGGAGGTGATGCGTGATAAGGGTACCGTTTGGAAGGAGATCGTGGAGAAATACGAGCTTGAGAAAACCATATTGGAGGACATAACCTGCTATGAAGCCCTCCAAACAGTGCTGCATTTTGAGTTTCAACATGTGTCTAGCATGAACAAGAGTAGGGAATATGGGTTTGGGGGGCATGTTGATACCTTCAAGAGTATCAAATTTTGGGTGGAGAAACTAAGACAGATGAAGATCATACCATCATATCAACAATGA 1131 0.5111 MDAQTFVALVVGVTGLTGLSLVQALKQPNSPGGPWKVYGAARRTPPRWFPPSTIDHFISFDAMDSSDTRAKLFPIATEVTHLFWITFQIHAEEEVNIRVNKTMLLNVLTALKSCNSSKLAHVTLQTGTKHYMGPIFDPLHSTQLISHDPPFRENMARLPYPNFYYALEDLVASYAPSLTYSVHRSSIIIGASSRSVHNALFTLAAYALICRHTGLAFRYPGTKYTWEHFCDMTDAGVLAQQHVWAAVTPEAKNQAFNCTNGDVFTWKSIWKLLSELFDVEFVAFDETQALDLVEVMRDKGTVWKEIVEKYELEKTILEDITCYEALQTVLHFEFQHVSSMNKSREYGFGGHVDTFKSIKFWVEKLRQMKIIPSYQQ* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1156 376 Pfam NAD dependent epimerase/dehydratase family 8 248 IPR001509 -
Pvu3g1156 376 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE 3 372 - -
Pvu3g1156 376 CDD 5beta-POR_like_SDR_a 7 310 - -
Pvu3g1156 376 Gene3D - 6 372 - -
Pvu3g1156 376 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE-LIKE 3 372 - -
Pvu3g1156 376 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 316 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1156 Pvu-Chr3 27997220 27998350 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1156 - - gmx:100812240 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1156 3 27997220 27998350 Pvu3g1156 3 27997220 27998350 ECH