Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1125 ATGGCTAATGTGCTCTTGGTATGTGGTGTTTGCACCAGAGAGAGAGAGGGGCATTGTGGTCATAATGCAACTAAGCTTCATGTTCCCAGAAAGGCACATTCTCAATTCCTCTCCTACGTTTCTGTTTCACACACTCAAACCATATTCCAAACCCCAATTTATTTCTTCATTTTCCTTCTCGTCCCCCAAACCTCTCTGTGCACATTCTTCTTCTCTGCCGATTCCATGACCGCCGGCGCTATGGCTACGGCCGCCGGAGCGGCGATGACTCTGTACCTCTTATTCAGGCGGAGGAAGAAGGCCGAAGAGGAATGGTCGAGAGCGCGGACCTTGAGGGCGAAGCCAGCTCAGGCGCCGGCGAATCTGTTTGAATCGATAGTGACGTTGTCGGAGACGGTGAGGTTCACTTACTCCGAGACTATTGGGAAATGGCCAATCGCAGACTTGGCCTTCGGTATCAATTCCTTCATGCGCAAACAGGGTGATTTGTCAGTTGCGAGTGTGTATGGTGGAAGCGGTTGTGTGGAGTTGAAGGGCCCTGAAGCTGTAGCCGACTTAGAGATACTATTGAGGCTGTTAACTCTGTGCATGCTTTTCTCCAAGAAACCGTTTCCCGAGTTTTTAGATTCTGCTGGATTCTCGCAGGACCAGGTCCTTCTCCACAGCCCCAAAGCTGAGCTTCTGAAGCCCGCTTTCACTATTATACATGATATGCAATCAAGATGTTTCCTTCTATTGATCAGGGGAACTCATAGCATAAAAGACACACTGACAGCTGCAACTGGTGCTATGGTTCCTTTTCACCATTCCATTCTTAATGATGGACAGATAAGTAACTTGGTTTTAGGACATGCACACTGTGGTATGGTTGCTGCAGCTCGTTGGATTGCAAAAGTCTGCACTCCTACATTACTTAAGGCTCTTGATGAATGTCCAGACTCAAAAGTCAAGATTGTTGGACACTCACTTGGTGGTGGTACTGCATCACTGTTGACTTATATTCTTAGGGAACAAAAAGAGTTATCTTCAAGCACCTGTGTCACATTTGCTCCAGCTGCTTGTATGACATGGGAGTTAGCTGAATCAGGGAAGCACTTTATCACCACCATTATAAATAATTCCGACTTGGTGCCCACATTATCAGCTTTCTCTGTTGATGATCTTCGTTCTGAGGTTGAACATACAAAAGTTCTGAATGTCATATATCGCTCAGCAAGTATTCTTGGGTCTCACTTACAATCTATAAGTGCAAAAGACAAAGTAACTGGTGTAGGTGCAATTCTACTGCCTGTAACCAGTAGTACCGAGGTTGTGATAAAGCATGCACGAGGTGTTGCAAAAGCTGTTGTCAAAACTATGGCTGCACACACTCAGAATATTGGTCCATTGTCAAAATCTAAATTAAATAACTTGGTCAACATGTCTCTTGGACCAAAAAATATAAGTAAATCTCTCTTGACTGAAAGTGTGTTTATGCTTAATAAAGATGAACCAAACTCCTCAAGTGAAAGATTTGGACTTGATGTAGTAGATGAAGAGGAGCCAGTCATTGATGCCAATGAACACATTACAGAAGGTGAATTGTGGAATGAGCTAGAAAAACAGAATATATTAAACATCCAAAATCAGGTAGACGAGGCAGCTAAAGCAAAAGAGATAATTGAGGAAGATCATCTTGTTGATACTAGCAATTCAATCTTAACATCTGATCTAGTAGATAGCTATTGTTTTTATCCTCCAGGTAAAATCATGCATATTGTCTCTGCACCTTCTGATGAATCTAGTTCAAACTCCAAGGAGGAACATATCAAATTATATGAAACACCTAGACAGCTGTATAGCAAGCAGCCCCGCAGGACAGATTGTAAAATCTTCGATATGGGACTTGGGATAATGGGATATGGGCTTACAACATCATTTAATTTCCTAAGTTATCCAAATGAACACACAAAATCACACGCACTGACTTTATACGATAAAGTCATTAAGTAA 1992 0.4272 MANVLLVCGVCTREREGHCGHNATKLHVPRKAHSQFLSYVSVSHTQTIFQTPIYFFIFLLVPQTSLCTFFFSADSMTAGAMATAAGAAMTLYLLFRRRKKAEEEWSRARTLRAKPAQAPANLFESIVTLSETVRFTYSETIGKWPIADLAFGINSFMRKQGDLSVASVYGGSGCVELKGPEAVADLEILLRLLTLCMLFSKKPFPEFLDSAGFSQDQVLLHSPKAELLKPAFTIIHDMQSRCFLLLIRGTHSIKDTLTAATGAMVPFHHSILNDGQISNLVLGHAHCGMVAAARWIAKVCTPTLLKALDECPDSKVKIVGHSLGGGTASLLTYILREQKELSSSTCVTFAPAACMTWELAESGKHFITTIINNSDLVPTLSAFSVDDLRSEVEHTKVLNVIYRSASILGSHLQSISAKDKVTGVGAILLPVTSSTEVVIKHARGVAKAVVKTMAAHTQNIGPLSKSKLNNLVNMSLGPKNISKSLLTESVFMLNKDEPNSSSERFGLDVVDEEEPVIDANEHITEGELWNELEKQNILNIQNQVDEAAKAKEIIEEDHLVDTSNSILTSDLVDSYCFYPPGKIMHIVSAPSDESSSNSKEEHIKLYETPRQLYSKQPRRTDCKIFDMGLGIMGYGLTTSFNFLSYPNEHTKSHALTLYDKVIK* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1125 663 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 76 615 - -
Pvu3g1125 663 Gene3D alpha/beta hydrolase 204 420 IPR029058 -
Pvu3g1125 663 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 76 615 - -
Pvu3g1125 663 Coils Coil 530 557 - -
Pvu3g1125 663 Pfam Lipase 3 N-terminal region 115 187 IPR005592 GO:0016042
Pvu3g1125 663 Pfam Lipase (class 3) 245 383 IPR002921 GO:0006629
Pvu3g1125 663 SUPERFAMILY alpha/beta-Hydrolases 210 383 IPR029058 -
Pvu3g1125 663 CDD Lipase_3 241 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1125 Pvu-Chr3 26906458 26912405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1125 76 615 Acyl Lipid Metabolism Gene Families AT4G16070 51.501 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1125 - - gmx:100801263 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1125 3 26906458 26912405 Pvu3g1125 3 26906458 26912405 ECH
Pvu3g1125 3 26906458 26912405 Pvu9g2603 9 36481707 36486762 PCT