Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0742 ATGTTAATTGTGAAAAGTGGAAAAGTGTCTGACATAGTTCACAAGTGTCATGTTCCAGCAGTTTCTGACATGGGATCCAAAGAGAAAAAAGTTAGATCTCTGAGCAATACTAGCTTTTCTTATCTGTGCCTTACGATCTATTCTCAAGATGAAATACAAACCAACAATCTTAAGTATATTTTCAGTTGCAAGAGATCACTCCAAAAGAACCACCTTCATTTGCTAGCCTATAAAAACATGGATCCTCAGCTGCTGCAGGTAGTTGCACTGTTGACAATGATAGCATTTGGAGGCACAAGTTGGAGTATAGAAGCCTGCAGCCCCATTGACCTGGAAGCTTTGATGAGCTTCAAGAATGGAATTCAAAAGGACACATCTGGTCGCTTAGCTAAGTGGATTGGTGCGAGCTGCTGCAAGTGGGAAGGTATTGTCTGTGAAAATGCAACCTCTAGAGTGACACAGATCAATCTCCCAGGATTTATTTCCACAGATACAGATTTATTTCAAACACAAATGATAGGGCGGATTTCTCCTTCCATAACACTCCTCGCCTCCCTTGAAATCATTGATCTTGGTGGTTTAGTTGGTCTTAGTGGAGCTATTCCGCACACCATTGGTTTGCACCTACCAAAGCTCCAAAAGCTCTACCTTTATGGCAACAATTTAACTGGTCCAATACCAGAAAGCATTGGACAGTTTCCAAACCTCCAAGAACTAGCTCTCCAGGAAAATCAGCTATGGGGGTCTATTCCTATGAGCCTTGGAAGCCTTAAAAGTCTCAAAAGGTTGCTGCTTTATTCAAATAAATTTTCAGGTACAATACCAGACTCACTTGGGAATTTGATAAATTTGATAGAATTGGATGCTCATGACAATGCTATTGTGGGTAATATACCCAATAGTGTTGGTGAGATGAAGGCTTTGACAAAGCTTGATCTTTCAAACAATTTCCTAAGCGGGAAGATGCCTTCTTCATTAACCAATTTAACCGCCATTTCAGTTTTGTACCTGAACACCAATTCTCTTGAGGGAACCATAACATTTCCTTCAAGACCTGGTGAAATGTCTTCTCTGGGCTTCTTAAGACTCCATAATAATCTCCTTGTTGGAAATATACATTCCAATATTGGCTATTTGGCATCTCTTCAAAGACTTTCACTATCAAACAACAAACTTGAAGGAGCACTGCCGTCTAGTTTAGGCAATTTGGTATCACTGACTGAGTTATATCTCAGTGGTAACTTCTTATCTGATCAAATACCAAAATCAGTAGGCCAACTTTCTCGGCTCATAATGTTGAACATCTCTAGAAATTTGATTGAAGGACCATTACCTCAAGAGATATCTTCCCTTCAAAATCTTCAAACAGTTGATCTTTCTTTCAACCATCTGAAACTCTCTGCCATTCCAAAATGGATGGCAAACATGTCATCACTTTCCAACATTTACTTGGCTGGTTGTGGAATCCAGGGCCAAATTCCAGATTTTTTCCAAACAACCAATAGTCCAATAGAGGAACTGGACTTGTCAGTAAACATTCTCAGTGGAAGCATACCATCATGGATAGGAAGCCTCAGTCAACTCTACTTGTTAAATCTCTCTAGGAACTCCCTTTATTCAGACATCCCTGATTCCTTTAGAAATTTGCAAGATCTAGGTGTCCTTGATCTTCACTCAAATAGACTAACAGGTTCCATAGCTCCACTATTTGACATAAAACAAGGTATTTTCGGGGGTTCACTGAAATTTGTTGATCTTTCTGAAAACAACTTCTCAAGTGGAATTGAGGAAATTGGTGGAGGGCAATGTAGTATTCAGTTTCTGAATTTGTCCCATAACCATCTGGAAGGTAGGTTACCAAATTCAATTGGGAGATTGAATTCACTTAATAGTTTGGATTTGAGCTTCAACGAATTAGGCTCCAACATGCCAGAAGTGCTGGCAAATTTAACCTCATTGGAGATATTGAAGCTACAGGAAAATCACTTCACCGGTAAAATTCCAAACGGATTTCTCAAGTTGTTGTGGCTAAAGGAATTAAACGTATCTAACAATCATCTCGAAGGGGAAATTCCAGAGGGCAAACCTTTGATTGACTTTCCTCAGAGTTCATATTCTGGAAATAAAGGGTTATGTGGAAAGCCTCTCGGTCCTTGTAAACTTTGA 2166 0.3952 MLIVKSGKVSDIVHKCHVPAVSDMGSKEKKVRSLSNTSFSYLCLTIYSQDEIQTNNLKYIFSCKRSLQKNHLHLLAYKNMDPQLLQVVALLTMIAFGGTSWSIEACSPIDLEALMSFKNGIQKDTSGRLAKWIGASCCKWEGIVCENATSRVTQINLPGFISTDTDLFQTQMIGRISPSITLLASLEIIDLGGLVGLSGAIPHTIGLHLPKLQKLYLYGNNLTGPIPESIGQFPNLQELALQENQLWGSIPMSLGSLKSLKRLLLYSNKFSGTIPDSLGNLINLIELDAHDNAIVGNIPNSVGEMKALTKLDLSNNFLSGKMPSSLTNLTAISVLYLNTNSLEGTITFPSRPGEMSSLGFLRLHNNLLVGNIHSNIGYLASLQRLSLSNNKLEGALPSSLGNLVSLTELYLSGNFLSDQIPKSVGQLSRLIMLNISRNLIEGPLPQEISSLQNLQTVDLSFNHLKLSAIPKWMANMSSLSNIYLAGCGIQGQIPDFFQTTNSPIEELDLSVNILSGSIPSWIGSLSQLYLLNLSRNSLYSDIPDSFRNLQDLGVLDLHSNRLTGSIAPLFDIKQGIFGGSLKFVDLSENNFSSGIEEIGGGQCSIQFLNLSHNHLEGRLPNSIGRLNSLNSLDLSFNELGSNMPEVLANLTSLEILKLQENHFTGKIPNGFLKLLWLKELNVSNNHLEGEIPEGKPLIDFPQSSYSGNKGLCGKPLGPCKL* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0742 721 PRINTS Leucine-rich repeat signature 308 321 - -
Pvu3g0742 721 PRINTS Leucine-rich repeat signature 626 639 - -
Pvu3g0742 721 Gene3D Ribonuclease Inhibitor 399 502 IPR032675 -
Pvu3g0742 721 Gene3D Ribonuclease Inhibitor 604 719 IPR032675 -
Pvu3g0742 721 Gene3D Ribonuclease Inhibitor 105 162 IPR032675 -
Pvu3g0742 721 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 82 720 - -
Pvu3g0742 721 SUPERFAMILY L domain-like 105 393 - -
Pvu3g0742 721 Pfam Leucine Rich Repeat 605 625 IPR001611 GO:0005515
Pvu3g0742 721 Pfam Leucine Rich Repeat 308 329 IPR001611 GO:0005515
Pvu3g0742 721 Pfam Leucine Rich Repeat 211 231 IPR001611 GO:0005515
Pvu3g0742 721 SMART LRR_typ_2 257 281 IPR003591 -
Pvu3g0742 721 SMART LRR_typ_2 626 649 IPR003591 -
Pvu3g0742 721 SMART LRR_typ_2 525 548 IPR003591 -
Pvu3g0742 721 SMART LRR_typ_2 451 476 IPR003591 -
Pvu3g0742 721 SMART LRR_typ_2 209 233 IPR003591 -
Pvu3g0742 721 SMART LRR_typ_2 379 402 IPR003591 -
Pvu3g0742 721 SMART LRR_typ_2 403 427 IPR003591 -
Pvu3g0742 721 SMART LRR_typ_2 650 674 IPR003591 -
Pvu3g0742 721 SMART LRR_typ_2 305 328 IPR003591 -
Pvu3g0742 721 SMART LRR_typ_2 549 579 IPR003591 -
Pvu3g0742 721 Pfam Leucine rich repeat N-terminal domain 110 145 IPR013210 -
Pvu3g0742 721 Gene3D Ribonuclease Inhibitor 163 398 IPR032675 -
Pvu3g0742 721 SUPERFAMILY RNI-like 347 692 - -
Pvu3g0742 721 Pfam Leucine rich repeat 505 562 IPR001611 GO:0005515
Pvu3g0742 721 Pfam Leucine Rich repeats (2 copies) 381 420 IPR025875 -
Pvu3g0742 721 Gene3D Ribonuclease Inhibitor 503 599 IPR032675 -
Pvu3g0742 721 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 82 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0742 Pvu-Chr3 10774827 10777264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0742 78 721 Receptor kinase-like Gene Family AT4G08850 32.323 5.15e-87 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0742 - - pvu:PHAVU_003G071800g 1381.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0742 3 10774827 10777264 Pvu3g0742 3 10774827 10777264 ECH
Pvu2g0825 2 11922116 11924609 Pvu3g0742 3 10774827 10777264 PCT