Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0740 ATGAAGAGAGCAGCTTTCTCCTCTTATTTCCACTGTTTGCGTTATAGTTATCATAATCCATTTATGGGTTTTGGTCCAAAATGTTTGAATGTGAAATTTTCCTCTTCTTTGGATTCAAGCAATGCCAGACCTTTTCCTGATTACTCCCCAAAAAAGCCTTCAGTTAAAGACACTGACTTTGTGCACCACCTTTCCACCACCATTAAGCAGCGCCGCTCCGAGCCTCTTCGCCGGATTCTCAAGCCCTTTGAGGCAAAGTTCAAGCCTGACTATTTCATTTGGGTTCTTATGAACATCAAGGATGACTATAAACTTGTGTTAGATTTCTTCAACTGGACGCGCCTTCGGAGGGACCCTTCTTTGGAAGCCCTTTGCATTGTGGTTCATATTGCTGTGGCTTCTAAGGACTTGAGAACGGCTCATAGGCTTGTTTTTGAGTTCTGGGGAAAGCCTCATTTGGATGTTGGTAACTCGTTTGCTCAATTTACTGAGAGGTTGATTTATACTTACAAGGACTGGGGTGCACATCCCTTTGTGTTTGATGTGTTCTTTCAAGTTCTCGTTGAAGCAGGGTTGCTTCTAGAAGCTGGTAAACTGTTTGATAAATTGGTCAATTACGGCGTTCTTTTTTCTGTAGATTCTTGTAATTTGTTTCTAGCTAGGCTATCTAACAGTTTTGATGGGAAAAATATGGCAATTAAGTTTAGGGGGAGCTTTCCTGATGTTGTAAGTTATAGTGTTATAATTAATGGATACTGTCAGGTTGAACAGATAGGAAAGGTCTTGAAGCTTTTGGAAGAGTTGCAGGGAAAGGGGTGTAAGCCAAACGAATACACATACAATAGTGTAATTTCCCTTCTTTGTAAGACTGGTAGAGTTGTTGAAGCGGAGCAAGTCCTGAGGGAGATGATAAACCAGAGGATTTTTCCTGATAATGTGGTGTATACAACTCTTATCAGTGGGTTCGGCAAGTCTGGGAATGTTTCAGCTAAATACAAACTGTTTGATGAAATGAGGCATAAGAAAATAGTTCCTGATTGTGTGACGTATACTTCCATGATTAACGGACTCTGTGAAGCTGGAAAGGTTGTTGAAGCACGCAAACTGTTTTGTGAAATGTTTGGAAAAGGATTTGAACCAGATGAAGTTACTTATACTGCTCTTATAGATGGGTATTGCAAGGCCGGAGAAATGAAAGAGGCATTCTCTCTTCACAACCAGATGGTTGAGAAGGGTCTGACTCCTAATGTTGTCACTTATACAGCATTGGTTGATGGCCTGTGTAAACGTGGTGAGGTAGATATAGCAAATGAGCTTCTTCTTGAAATGTCTGAGAAGGGCCTTCAACCAAATGTTTGCACATATAATGCACTAATCAATGGTCTTTGTAAGGTAGGAAATATAGAGCAAGCCATAAAACTTATGGAAGAAATGGATCTGGCAGGGTTTTATCCTGACACTTTTACATATACTACCCTCATTGACGCTTATTGTAAGATGGGTGAAATGGCCAAGGCTCATGAATTGCTGTGGGTTATGCTTGGTAAAAGAATTCAACCTACAATTGTTACTTTCAATGTGCTAATGAATGGGTTTTGCATGTCAGGGATGTTGGAAGATAGTGAAAGACTAATCAAATGGATGTTTGAAAAAGGTATTATGCCGAATGCCACAACATTCAATTTTCTTTTGAAGCAGTACTGTATTAGAACTAACATGCGTGCTACAACACAGATTTATAAGAGGATGTATGCTCAAGGAGTGATGCCTGACAATAATACATATAATATTTTGATTAAAGGGCATTGTAAAGCTAGAAATATGAAAGAGGCATGGTTTTTGCATAAAGAAATGGTTGAAAAGGGATTTAGTCTAACTGCTGCTTCCTATAATGCTCTTATAAAGGGTTTCTATAAGAGGAAGAAATTTGTGGAGGCTAAGAAGCTATTTGAGGAGATGAGAACTCAAGGATTTGTTGCAGAAAAAGAGATATATGATATTTTTGTTGATGTAAATTATGAAGAAGGGAACTGGGAAAATACTCTTGAGCTTTGTGATGAAGCAATAGAGAAATGTCTTGTTAAGAAAACTTAG 2094 0.3883 MKRAAFSSYFHCLRYSYHNPFMGFGPKCLNVKFSSSLDSSNARPFPDYSPKKPSVKDTDFVHHLSTTIKQRRSEPLRRILKPFEAKFKPDYFIWVLMNIKDDYKLVLDFFNWTRLRRDPSLEALCIVVHIAVASKDLRTAHRLVFEFWGKPHLDVGNSFAQFTERLIYTYKDWGAHPFVFDVFFQVLVEAGLLLEAGKLFDKLVNYGVLFSVDSCNLFLARLSNSFDGKNMAIKFRGSFPDVVSYSVIINGYCQVEQIGKVLKLLEELQGKGCKPNEYTYNSVISLLCKTGRVVEAEQVLREMINQRIFPDNVVYTTLISGFGKSGNVSAKYKLFDEMRHKKIVPDCVTYTSMINGLCEAGKVVEARKLFCEMFGKGFEPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKRGEVDIANELLLEMSEKGLQPNVCTYNALINGLCKVGNIEQAIKLMEEMDLAGFYPDTFTYTTLIDAYCKMGEMAKAHELLWVMLGKRIQPTIVTFNVLMNGFCMSGMLEDSERLIKWMFEKGIMPNATTFNFLLKQYCIRTNMRATTQIYKRMYAQGVMPDNNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNALIKGFYKRKKFVEAKKLFEEMRTQGFVAEKEIYDIFVDVNYEEGNWENTLELCDEAIEKCLVKKT* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0740 697 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 451 485 IPR002885 -
Pvu3g0740 697 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 626 660 IPR002885 -
Pvu3g0740 697 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 241 275 IPR002885 -
Pvu3g0740 697 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 416 450 IPR002885 -
Pvu3g0740 697 Pfam PPR repeat family 240 289 IPR002885 -
Pvu3g0740 697 Pfam PPR repeat family 310 358 IPR002885 -
Pvu3g0740 697 Pfam PPR repeat family 380 429 IPR002885 -
Pvu3g0740 697 Pfam PPR repeat family 450 499 IPR002885 -
Pvu3g0740 697 Pfam PPR repeat family 520 568 IPR002885 -
Pvu3g0740 697 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 346 380 IPR002885 -
Pvu3g0740 697 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 381 415 IPR002885 -
Pvu3g0740 697 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 591 625 IPR002885 -
Pvu3g0740 697 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 486 520 IPR002885 -
Pvu3g0740 697 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 311 345 IPR002885 -
Pvu3g0740 697 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 69 233 - -
Pvu3g0740 697 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 233 684 - -
Pvu3g0740 697 TIGRFAM PPR: pentatricopeptide repeat domain 523 557 IPR002885 -
Pvu3g0740 697 TIGRFAM PPR: pentatricopeptide repeat domain 313 347 IPR002885 -
Pvu3g0740 697 TIGRFAM PPR: pentatricopeptide repeat domain 453 487 IPR002885 -
Pvu3g0740 697 TIGRFAM PPR: pentatricopeptide repeat domain 488 521 IPR002885 -
Pvu3g0740 697 TIGRFAM PPR: pentatricopeptide repeat domain 348 382 IPR002885 -
Pvu3g0740 697 TIGRFAM PPR: pentatricopeptide repeat domain 418 452 IPR002885 -
Pvu3g0740 697 TIGRFAM PPR: pentatricopeptide repeat domain 243 277 IPR002885 -
Pvu3g0740 697 TIGRFAM PPR: pentatricopeptide repeat domain 594 626 IPR002885 -
Pvu3g0740 697 TIGRFAM PPR: pentatricopeptide repeat domain 629 659 IPR002885 -
Pvu3g0740 697 TIGRFAM PPR: pentatricopeptide repeat domain 278 311 IPR002885 -
Pvu3g0740 697 TIGRFAM PPR: pentatricopeptide repeat domain 383 417 IPR002885 -
Pvu3g0740 697 Gene3D Tetratricopeptide repeat domain 573 694 IPR011990 GO:0005515
Pvu3g0740 697 Gene3D Tetratricopeptide repeat domain 230 328 IPR011990 GO:0005515
Pvu3g0740 697 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL 69 233 - -
Pvu3g0740 697 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL 233 684 - -
Pvu3g0740 697 Pfam PPR repeat 629 658 IPR002885 -
Pvu3g0740 697 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 556 590 IPR002885 -
Pvu3g0740 697 Pfam PPR repeat 587 619 IPR002885 -
Pvu3g0740 697 Gene3D Tetratricopeptide repeat domain 329 477 IPR011990 GO:0005515
Pvu3g0740 697 Gene3D Tetratricopeptide repeat domain 478 572 IPR011990 GO:0005515
Pvu3g0740 697 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 276 310 IPR002885 -
Pvu3g0740 697 SUPERFAMILY HCP-like 392 658 - -
Pvu3g0740 697 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 521 555 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0740 1 694 Glycosyltransferase AT1G05670 54.830 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0740 - - gmx:100789069 1224.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0740 3 10751203 10753419 Pvu3g0740 3 10751203 10753419 ECH