Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0730 ATGGATCCCTCGTCTTCCTCGTCGCTCCCTCCGTCGCTTCACCTCGCCATGGCGGCGTTGCTCGGAGCCTCCTTCATGGCCATCTCCGCCTTCTACATGCACCGCCGCACCGTCGACCACGTACTCCACCGCCTCGTCGAACTTCGCCGCAAGCCGCTTGCCGCCTCCGAGGATGACAGCCACGATGACGACGATGATCGGAGCGGGTTCGGAGACGACGACGGAGGAATGGATACGGACGCCGATCCGAAGGACTATCGCCGAACCTTTTCGAGGTCCGTGGATGACACCTCAAACGTGCTTCGGAGCTATAGGTTTTCGTCTTCGATGCCTAACGTGGTTTCCGCAGCGGATTGGTTGCACGAGGACACTAAGAATCGTGCCTCGTCGCTCGAAAATCTTCAATTCGCGCAGCTAGGACTTCCGTCTAATCGAACGGGTTCCACCAATGGCGAGAGTGCTCAGATTTCGCGTTCGTATAAGAGGATAGCTTCTGTTGGTAGAATTATGACTCCGAGATCACCAGGGCTAAACGCATTTGAAAGTGCTGAGGATTCTGATGAGGAGGAAACACAGCTTGCTGATGACAATACCATTCCTTTCTCAGATGCTTACGGAGTAAATTCAGAAATGTGCAATTTGTCCGCTGTTCCATTTGGAGTTGATGATGCAAACTGTGCAAAAAATCAGTTGTATGGAGAGGTTTCAAAGGAAGCGAAAGCTGGTGCAGATATGAATGGTGTTGCCTCAACTTCTGTACATGTAGCCGGGGATGACTGTGTATTTGCCAATAATGTTTTACCTGCAAGAAACCCTGTGCATGAGACAAATATTGAAGAGGATGAAGTATGCAAAATGATTCAAGAATGCTTAGATTTGCGTAAGAGATATGTTTACAAGGAAAATATTACATTGAAGACAGAACCTGAGGAAACTAACTTTGATCCGTATCATTTTGAACCAGTTGAAGCAACAACACACCACTTTAGGATGGAAGATGGAGTCATGCATGTTTTTGCAAGTAAAACTGATACCGAAGAGCTCTTCCCTGTTGCAAGCTCAACCAGATTTTTTACTGATATGCATTACATTCTAAAAGTTATGTCTATTGGGAATGTTCGCTCTACATGCTACCACAGGCTACGATTTCTCGAGGAAAAATTCCGCCTTCATCTGTTACTAAATGCAGATAGGGAATTTCTGGCTCAGAAGGGTGCGTCACACCGGGATTTTTACAATATCAGAAAAGTTGATACTCATATTCATCATTCTGCTTGCATGAATCAGAAGCATCTTGTGCGCTTCATCAAGTCAAAATTAAGAAAAGAACCTGATGAGGTTGTTATCTTTAGAGATGGAAAGTATATGACACTTAAGGAGGTTTTTGAGAGTTTGGATTTGACTGGATATGATCTGAATGTTGATTTGTTGGACGTCCATGCAGATAAGACCACATTCCATAGATTTGACAAATTCAACCTTAAGTATAATCCTTGTGGACAGAGCAGACTAAGAGAGATATTTTTAAAGCAGGATAATCTTATCCAGGGAAGGTATCTGGCTGAAGTAACAAAGGAAGTTTTGATAGATCTTGAAGCAAGCAAATATCAGATGGCTGAGTATAGGATCTCTGTTTATGGAAGAAAACAGAGTGAGTGGGATCAGCTGGCTAGTTGGTTTGTTAACAATGCTCTATACAGTAAGAATGCTGTCTGGCTAATCCAGTTACCACGGTTATACAATGTGTACAAGAATATGGGAATTGTTACATCCTTTCAGAATATTTTGGATAATGTATTTATTCCTCTATTTGAGGTCACAGTGGATCCAAATTCTCATCCTCAATTACACTTGTTTTTGATGCAGGTGGTTGGATTTGATCTTGTAGATGATGAAAGTAAACCAGAGAGGCGTCCAACTAAGCACATGCCTACTCCAGCTGAGTGGACAAATAACTTCAATCCAGCATATTCTTATTACCTTTATTACAGCTACGCAAACTTGTACACACTCAACAAGCTGCGAGAATCTAAGGGAATGACCACAATAAAGTTGCGTCCTCACTGTGGAGAGGCAGGTGACAATGATCATTTGGCTGCTGCCTTCCTTCTATGCCACAACATATCTCATGGGATTAATCTACGTAAAACTCCAGTTTTGCAGTACTTGTATTATCTAGCACAGATTGGATTGGCTATGTCACCACTTAGCAATAATTCTCTTTTCTTGGACTATCACCGCAATCCATTACCAATGTTTTTCCAGCGAGGTTTAAATGTCTCTCTCTCCTCTGATGATCCTTTGCAAATTCATTTGACAAAAGAGGCATTGCTAGAAGAATATAGTGTTGCAGCAAAGGTATGGAAGCTCTCTGCCTGTGATCTGTGTGAGATAGCTAGAAATTCTGTCTACCAATCTGGATTTTCACACCAGGCAAAGTCACACTGGCTTGGGGAAAAATATTTGTTGAGAGGTCCCGAAGGAAATGATATTCATAAGACAAATGTTCCCAGTTTGAGGATTTCTTTCCGACACGAGACATGGAAAGAGGAAATGCAATATATTTATGCTGGTAAAGCCATCTTTCCTGATGATGTATACCCATGA 2607 0.4288 MDPSSSSSLPPSLHLAMAALLGASFMAISAFYMHRRTVDHVLHRLVELRRKPLAASEDDSHDDDDDRSGFGDDDGGMDTDADPKDYRRTFSRSVDDTSNVLRSYRFSSSMPNVVSAADWLHEDTKNRASSLENLQFAQLGLPSNRTGSTNGESAQISRSYKRIASVGRIMTPRSPGLNAFESAEDSDEEETQLADDNTIPFSDAYGVNSEMCNLSAVPFGVDDANCAKNQLYGEVSKEAKAGADMNGVASTSVHVAGDDCVFANNVLPARNPVHETNIEEDEVCKMIQECLDLRKRYVYKENITLKTEPEETNFDPYHFEPVEATTHHFRMEDGVMHVFASKTDTEELFPVASSTRFFTDMHYILKVMSIGNVRSTCYHRLRFLEEKFRLHLLLNADREFLAQKGASHRDFYNIRKVDTHIHHSACMNQKHLVRFIKSKLRKEPDEVVIFRDGKYMTLKEVFESLDLTGYDLNVDLLDVHADKTTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRYLAEVTKEVLIDLEASKYQMAEYRISVYGRKQSEWDQLASWFVNNALYSKNAVWLIQLPRLYNVYKNMGIVTSFQNILDNVFIPLFEVTVDPNSHPQLHLFLMQVVGFDLVDDESKPERRPTKHMPTPAEWTNNFNPAYSYYLYYSYANLYTLNKLRESKGMTTIKLRPHCGEAGDNDHLAAAFLLCHNISHGINLRKTPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPLPMFFQRGLNVSLSSDDPLQIHLTKEALLEEYSVAAKVWKLSACDLCEIARNSVYQSGFSHQAKSHWLGEKYLLRGPEGNDIHKTNVPSLRISFRHETWKEEMQYIYAGKAIFPDDVYP* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0730 868 PANTHER AMP DEAMINASE 12 866 - -
Pvu3g0730 868 TIGRFAM AMP_deaminase: AMP deaminase 309 855 IPR006329 GO:0003876|GO:0032264
Pvu3g0730 868 Pfam AMP deaminase 314 855 IPR006329 GO:0003876|GO:0032264
Pvu3g0730 868 MobiDBLite consensus disorder prediction 59 79 - -
Pvu3g0730 868 CDD AMPD 357 852 IPR006329 GO:0003876|GO:0032264
Pvu3g0730 868 Gene3D - 327 851 - -
Pvu3g0730 868 Gene3D - 427 517 - -
Pvu3g0730 868 MobiDBLite consensus disorder prediction 53 90 - -
Pvu3g0730 868 PANTHER AMP DEAMINASE 12 866 IPR006329 GO:0003876|GO:0032264
Pvu3g0730 868 SUPERFAMILY Metallo-dependent hydrolases 276 856 IPR032466 -
Pvu3g0730 868 MobiDBLite consensus disorder prediction 174 193 - -
Pvu3g0730 868 ProSitePatterns Adenosine and AMP deaminase signature. 761 767 IPR006650 GO:0009168|GO:0019239
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0730 Pvu-Chr3 10595523 10605772 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0730 K01490 - gmx:100793831 1486.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0730 3 10595523 10605772 Pvu3g0730 3 10595523 10605772 ECH