Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0695 ATGTTGGAAGGTCGTTCCTGCGTGGTTCCGAGGTTGTTTCCCAGCTCTTGTCAGGCAGATAACAAGTGGTCCTTCATGACATACCTGCCGGACACGAAGAATGGCAAGCGCCCTTATGATAGCGATGGTGAAGAAGAATCTCAGCCCAGGAAGAATAACAGGAGAGCGGATTCATGCCATCAAGGGGAGACAACTCCGTATCTGTATGAACAAAAGTATGATGCTGATGATTCTGTCCTTCCACAAATGGATGAGGATCAGAGGAAGGATTGTGAAGCCTTTCCTACCCAGATAAATGAACAAGAGCAACATCAAGGTGGGAATTCATTGGTGCTCTGGAGTGAGGTTCAAGTTAATAAGGAGGAAGAGGAAGGGTCCGGAGATTCATCAGATTCCAGTGAAGAGCAGATGGAGGAGCAGGCCCCTGATGAGCAGGAAGAACATCGTGGTGGGGATTCGTCAGATTCGGGTTCTCTTTTGCCGAGAATGAACCGGGACAGCTCAATCGCGTGTCTCAGCAGATGTTCGAGGTCCGATTATGGTTCCTTAGCTTCACTGAACAGGAGCTTTCGGAACACAATCCGAAGTGGTGAGTTGTATAGGTGGAGGAGACTGAAAGGCATAGTAGAACACTGGATATACTTTTCCTGTGCCCTTCTGGAATGGGAGGCCTACGATCCAATACGCGAGCGATGGATGCATTTACCAAGAATGGCTTCTAATGAATGCTTCAAGTGTTCGGATAAGGAGTCTTTGGCTGTAGGTACTGAGCTTATTGTATTTGGCAGGGAGATGAGGTCTCATGTGATTTACAGATACAGTCTATTGACTAACTCATGGTCTTCTGGGATGAGGATGAATGGTCCAAGATGTTTGTTTGGATCTGCCAGCCTTGGGGAGATTGCTATTTTGGCTGGTGGGTGTGATTCGGAGGGGCGTATCCTTGACTCGGCGGAACTGTACAACTCTGAGAATCAAACCTGGGAAGTTCTCCCTAGCATGAACAAGCCCAGGAAGATGTGCTCTGGGGTATTTATGGATAGAAAGTTTTATGTTATTGGGGGAATTGGTGGAAAAGATTCTAAGCTTCTTACATGTGGTGAAGAATACAATTTACAAACAAGAACATGGACAGAGATTCCCAACATGTCACCTGGACGCAGTGCTACCTCTGACATGCCTGCAACAGCCGAGGCACCACCTCTGGTTGCGGTTGTAAATAATGAACTGTATGCTGCTGATTATGCAGACATGGAGGTTAAAAAATACGATAAAGAGAGAAGATTTTGGCGCACCATTGGGAGACTGCCTGAGAGAGTAGTGTCGATGAATGGTTGGGGTCTTGCATTCAGGGCATGTGGAGATAAGCTAATTGTGATTGGTGGTCCAAGGACTCATGGTGAGGGTTTTATTGAACTCAATTCCTGTGTTCCTGGTGAAGGACCTCCACAGTGGAATCTACTTGCCAGAAAACGCTCTGGTAACTTTGTCTATAATTGTGCTGTCATGGGATGCTGA 1518 0.4677 MLEGRSCVVPRLFPSSCQADNKWSFMTYLPDTKNGKRPYDSDGEEESQPRKNNRRADSCHQGETTPYLYEQKYDADDSVLPQMDEDQRKDCEAFPTQINEQEQHQGGNSLVLWSEVQVNKEEEEGSGDSSDSSEEQMEEQAPDEQEEHRGGDSSDSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNTIRSGELYRWRRLKGIVEHWIYFSCALLEWEAYDPIRERWMHLPRMASNECFKCSDKESLAVGTELIVFGREMRSHVIYRYSLLTNSWSSGMRMNGPRCLFGSASLGEIAILAGGCDSEGRILDSAELYNSENQTWEVLPSMNKPRKMCSGVFMDRKFYVIGGIGGKDSKLLTCGEEYNLQTRTWTEIPNMSPGRSATSDMPATAEAPPLVAVVNNELYAADYADMEVKKYDKERRFWRTIGRLPERVVSMNGWGLAFRACGDKLIVIGGPRTHGEGFIELNSCVPGEGPPQWNLLARKRSGNFVYNCAVMGC* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0695 505 MobiDBLite consensus disorder prediction 127 141 - -
Pvu3g0695 505 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 505 - -
Pvu3g0695 505 MobiDBLite consensus disorder prediction 35 58 - -
Pvu3g0695 505 MobiDBLite consensus disorder prediction 28 75 - -
Pvu3g0695 505 Pfam Kelch motif 289 335 IPR006652 GO:0005515
Pvu3g0695 505 Pfam Kelch motif 337 384 IPR006652 GO:0005515
Pvu3g0695 505 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 505 - -
Pvu3g0695 505 Gene3D - 215 477 IPR015915 GO:0005515
Pvu3g0695 505 SUPERFAMILY Kelch motif 219 467 IPR015915 GO:0005515
Pvu3g0695 505 MobiDBLite consensus disorder prediction 119 161 - -
Pvu3g0695 505 SMART kelc_smart 349 397 IPR006652 GO:0005515
Pvu3g0695 505 SMART kelc_smart 257 300 IPR006652 GO:0005515
Pvu3g0695 505 SMART kelc_smart 301 348 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0695 Pvu-Chr3 9642077 9645278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0695 166 382 EF-hand Containing Proteins AT4G39560 25.229 6.59e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0695 - - pvu:PHAVU_003G067300g 1022.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0695 3 9642077 9645278 Pvu3g0695 3 9642077 9645278 ECH