Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0666 ATGAAGTTTATGAAACTGGGATCTCGTCCAGATACCTTTTACACTGCAGAGTCTATAAGGACAATCTCTTCTGAAGTTTCAAGTGACCTCATAATTCAAGTGAAAGGAACTAGATATCTTCTTCACAAGTTTCCACTATTGTCCAAATGTTTGCGCCTGCAAAGGCTATGCTCAGAGAGTTCTGATTCTCCTCAGCAACAAATAGTCCAACTCCCTGAATTTCCTGGTGGGGTGGAAGCATTTGAGCTGTGTGCCAAGTTCTGCTATGGCATAACCATCACTCTCAGTGCATACAACATTGTAACTGCGCGTTGCGCCGCGGAATACTTGCAGATGACTGAGGACGTTGAGAAGGGGAATTTGATTTACAAGCTTGATGTTTTCTTTAATTCTTGCATCCTTAATGGGTGGAAGGATTCCATTGTGACTCTACAATCCACCAAAGCATTGCCTTTGTGGTCGGAGGACTTGGCAATTACCAGCAGATGCATTGAGACCATTGCCTCAAAGGTCTTAAGCCACCCCTCAAAGGTGAGTTTATCACACAGTCATTCCCGGAGGGTAAGGGATGATGTGTCTTCTTGCAATGGAACCGAAAGTCTGAGACACAAATCAGCAAGCAAGGGATGGTGGGCTGAGGATTTAGCAGATTTGAGCATAGACCTGTACTGGAGAACCATGATAGCTATCAAATCTGGTGGCAAGACACCCTCAAATCTCATTGGTGATGCATTGAAGATTTATGCATCTAGATGGCTACCGAATATCAGGAAGAATGTGCTTGTCAAGAGGGAGACTGAATCTGACTCTGATTCAGATTCGGATTCTGCGAGTGAAGTAAGTTCAAAGCATAGACTGCTTTTGGAATCAATTGTGAGCTTGCTTCCGGCAGAAAAAGGTGCTGTTTCTTGCAGCTTCCTTCTTAAACTGTTAAAGGCAGCCAATATTCTCAAAGCTTCGGCTTCTTCAAAGGTGGAATTGGCCACAAGAGTAGGACTTCAACTGGAGGAAGCCTCGGTTAATGATCTTCTGATACGCTCAGTGTCTAAGACAAATAATATGCTGTACGAAGTGGACTTGGTTATGACCATATTGGAACAATTTTTGTTGCAAGGTCAGAGTCCACCAACCAGCCCTCCAAGATCAAGGTTTACCATTGAAAGGAGAAGGTCTCGTTCGGCAGAGAACATTAAATTCGAGTTCCAAGAGAGTAGGAGGTCCTCCTCAGCATCTCATGGCTCAAAACTGAAGGTGGCAAAGCTAGTGGATAGCTACCTTCAGGAAGTTGCCAGGGATGTGAATTTGCCTCTCTCAAAATTCATTGCTCTTGCTGAAACTATACCAGATTTTGCAAGACAAGATCATGATGACCTGTACAGAGCAATTGACATTTATCTCAAGGCACATCCAGAGCTGAATAAGAACGAAAGGAAGAGACTATGTCGAATTCTAGACTGCAAAAAGTTGTCTGTGGAAGCTTGCATGCATGCAGCACAGAATGAGCTACTTCCCCTAAGGGTGGTTGTTCAAGTTCTCTTCTTTGAGCAAGCACGAGCAGCAGCAGCTGGTGGCAAAGTGACTGACATGCCAAGCAACATCAAGGCACTACTCACCGCACATGGCATTGACCCATCAAAACACACAGCACCATTGAGCACCACAACAAGTATACATGCTGATGACAATTGGAGTGTCTCTGGATTCAAGTCACCAAAGTCAACTAGGAACCCAACTCTCAGAATGAAGCTAGCTGAGGATGACTTGGATGAAAATGTTGTGCCTCGTGATGAAATTGGGAGAACTTCCAGATTTAAAGGTCTACTTGCTCTTCCTACTCAGCCCAAACGCATGTTTAGCAAGTTGTGGGCTGCCAACAGAACTGCCACTGAAAAGAACTGA 1899 0.4439 MKFMKLGSRPDTFYTAESIRTISSEVSSDLIIQVKGTRYLLHKFPLLSKCLRLQRLCSESSDSPQQQIVQLPEFPGGVEAFELCAKFCYGITITLSAYNIVTARCAAEYLQMTEDVEKGNLIYKLDVFFNSCILNGWKDSIVTLQSTKALPLWSEDLAITSRCIETIASKVLSHPSKVSLSHSHSRRVRDDVSSCNGTESLRHKSASKGWWAEDLADLSIDLYWRTMIAIKSGGKTPSNLIGDALKIYASRWLPNIRKNVLVKRETESDSDSDSDSASEVSSKHRLLLESIVSLLPAEKGAVSCSFLLKLLKAANILKASASSKVELATRVGLQLEEASVNDLLIRSVSKTNNMLYEVDLVMTILEQFLLQGQSPPTSPPRSRFTIERRRSRSAENIKFEFQESRRSSSASHGSKLKVAKLVDSYLQEVARDVNLPLSKFIALAETIPDFARQDHDDLYRAIDIYLKAHPELNKNERKRLCRILDCKKLSVEACMHAAQNELLPLRVVVQVLFFEQARAAAAGGKVTDMPSNIKALLTAHGIDPSKHTAPLSTTTSIHADDNWSVSGFKSPKSTRNPTLRMKLAEDDLDENVVPRDEIGRTSRFKGLLALPTQPKRMFSKLWAANRTATEKN* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0666 632 Pfam NPH3 family 210 494 IPR027356 -
Pvu3g0666 632 SUPERFAMILY POZ domain 23 115 IPR011333 -
Pvu3g0666 632 ProSiteProfiles NPH3 domain profile. 209 518 IPR027356 -
Pvu3g0666 632 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 1 630 - -
Pvu3g0666 632 Coils Coil 624 632 - -
Pvu3g0666 632 Gene3D Potassium Channel Kv1.1; Chain A 16 118 IPR011333 -
Pvu3g0666 632 PANTHER OS12G0117600 PROTEIN 1 630 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0666 Pvu-Chr3 9111138 9114834 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0666 26 542 EF-hand Containing Proteins AT3G44820 35.240 2.57e-95 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0666 - - gmx:100798413 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0666 3 9111138 9114834 Pvu3g0666 3 9111138 9114834 ECH