Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0642 ATGGAAACATGCAGTGAGGAAAGAGAAAAGACGGACCATAGCGAAGCTCCCATTCAAGGAGACATCTTAGAGATTATATTCTCTCACTTGCCACTCATCCACCTCGTCTCACCTTCTCACGTGTCACGTGCATGGAACCGTGCACTCTCCACCTCCCTCCGCCACGTCAACCCCGTCAAACCCTGGCTCACGCTGCACATCCAGAACCCCCGTGCACTGCACCTCACCACCACCTTCGCCTACGACCCACGCTCCCGCACCTGGTTCCAAATCCACGCGCCGCATCCCAACCACACCTCCCCCCTGCGCGCCTCGCACTCCACACTCCTATACACGCTCTCTCCCTGCGAGTTCGCCTTCTCCCTCGACCCCCTCCGTCTCCACTGGCACCACGCGTGTTCCCCACGCGTCTCTCGCATAGACCCCATCGTCGCGCGCGTGGGACCTCGCATCGTGCTGGCGGGAGGCGCGTGCGACTTCGAGGACGATCCCCTGGCGGTGGAGGTATACGACATGGAGTCCCGCGCGTGGACGCGCTGCCAGTCGATGCCAGCCATTCTCAAGGACTCCTCCGCTTCCACGTGGCTCTCGACCGCCGTCGTCGGGGAGAGGATGTACGTGACGGAGAAAAACTCCGGCGTGACGTACTCGCTGGATTGCAACACGATGACGTGGAATGGCCCGTTGGAGGTGCGTCCGGATCGAAGTGTTTTCCACTGCGTGACCGGAGCGATAGGCGGTCGTTTAATGGTGGCGGGGATGGTGGGCGAGGCGGAGAAGGTAGAGGAGGTGAAGTTGTGGGAAGTGAAAGGGGAATTAGCGTTGGAAAGTGAATTAGGGTATTGGTGTGAGGAGTTAGCAGCGATGCCGAAGGAGTTGATGGTGAAGATTATGGGTACTGGTTCGATTGAGGTTAACTGGATTGGGAATTCTGTGTATTTTCAGAACCTATGGAAAGCGGAGGAAATTGTTGTGTGCGAGGTTGGGAATAATGGCGGAAGCTGCGAATGGGAAAGCGTGAGGAACGTAACGGTGAGTGATGTGAGTCGCATGCAGAGAACCGTGTTCTGTGGTGCCCATGTTGGGCTTCAAGATTTGAAGAAGGCAATTAATAAGAATTGTATGTTTGTGGAGAAAGTAGTTTAA 1146 0.5637 METCSEEREKTDHSEAPIQGDILEIIFSHLPLIHLVSPSHVSRAWNRALSTSLRHVNPVKPWLTLHIQNPRALHLTTTFAYDPRSRTWFQIHAPHPNHTSPLRASHSTLLYTLSPCEFAFSLDPLRLHWHHACSPRVSRIDPIVARVGPRIVLAGGACDFEDDPLAVEVYDMESRAWTRCQSMPAILKDSSASTWLSTAVVGERMYVTEKNSGVTYSLDCNTMTWNGPLEVRPDRSVFHCVTGAIGGRLMVAGMVGEAEKVEEVKLWEVKGELALESELGYWCEELAAMPKELMVKIMGTGSIEVNWIGNSVYFQNLWKAEEIVVCEVGNNGGSCEWESVRNVTVSDVSRMQRTVFCGAHVGLQDLKKAINKNCMFVEKVV* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0642 381 PANTHER KELCH REPEAT-CONTAINING F-BOX-LIKE PROTEIN 2 370 - -
Pvu3g0642 381 Pfam F-box domain 21 52 IPR001810 GO:0005515
Pvu3g0642 381 SUPERFAMILY F-box domain 21 52 IPR036047 GO:0005515
Pvu3g0642 381 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 2 370 - -
Pvu3g0642 381 Gene3D - 66 276 IPR015915 GO:0005515
Pvu3g0642 381 SUPERFAMILY Kelch motif 71 253 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0642 Pvu-Chr3 8470942 8472667 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0642 - - gmx:100799807 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0642 3 8470942 8472667 Pvu3g0642 3 8470942 8472667 ECH
Pvu2g0668 2 7361596 7363445 Pvu3g0642 3 8470942 8472667 PCT