Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0640 ATGGTCATAGTCGCATTATCCTCCTCTCTTCCCGCCGGGAGAAACCTCTTCTCCTCCTTACCATCAACTCCGCCACCCACCGACCGCACTGCTGCCGTTTCCGCCACCCCGCCACCGCCAATCCCCGTCCCCAAGTACCCCCCGCCTCGAAAATCCCAAAACCCTCCTCAGCCCCCGACCCCGAATCCCGGCCTCAAATACCACCGTAATTCCAAGTACCACAAGCGCGTGCCGAGCGACGGCGTCGTCGTCTCCGACGCCGCCGACCGGTCCGTGATTATCGGTGAGTCCGGCGTGTCGTACCTGCTCCCCGGTGCGCCGTTCGAGTTCCAGTTTAGCTACTCGGAGACGCCGAAGGCGAAGCCGATCGCGATTCGGGAGCCGGCGTTCCTGCCGTTCGCGCCGCCCACGATGCCGCGGCCGTGGACGGGGAAGGCGCCTCTGAAGAGCAAAAAGAAGAAGATTCCACTGTTCGACTCGTTCAATCCTCCACCGCCTGGCACGAAGGGCGTGAAGCGCGTGGAAATGCCGGGGCCGTTTCCAATGGGGCAGTTTCCGAAGGAGGGCAAGACGAGGGAAGAGATTCTCGGGGAGCCTCTGAAGAAGTGGGAGGTACAAATGCTTGTTCAGCCCATGATATCTTATAATCGCCAGGTTAATCTTGGAAGGGATGGATTAACGCATAACATGCTGGAATTGGTACATTCACATTGGAAGCGTAGCCGTATCTGTAAAATTCGTTGTTTAGGTGTTCCAACTGTTGATATGGATAATGTTTGCCATCATATTGAGGAGAAAACTGGGGGGAAAATAATTCATCGAGCTGGTGGTGTAGTGTACCTTTTCCGTGGCAGAAATTACAACTATAGAACTCGTCCACAGTATCCAGTGATGCTCTGGAAGCCAGCCACTCCTGTTTACCCAAAACTTATAGAAGATGCTCCAGGAGGATTAACGAAAGCTGAAGCTGATGAATTACGGAAGAAGGGAAAAAGCCTGTTACCAATTTGTAAATTAGCAAAAAATGGAGTATATACATCCCTTGTAAAGAATGTCAGAGATGCTTTTGAAGGAAGTGTTTTGGTAAAAGTTAACTGCAAGGGATTGGATCCTAGTGATTACAAGAAAATAGGTGCCAAACTCAAGGATTTGGTTCCTTGTGTGCTGTTGTCTTTTGATGATGAACAGATACTGATATGGAGGGGCAAAGATTGGAAATCAAGGTACCACCAACCTGTTCCAGTTTTTGCACCTTCAAAATCTGGTTTTACAGGGAATTCAGAAAGTTCAGGTGAGGCTGATGGCAACCAAACTGAGCATGGCGACAACAATGTAGTGAACACAAGCCCAAAAATGTTGTCTCTGTGGAAGCGTGCAATTGAGTCAAGCAAAGCTTTGTTGCTGGATGAATTTAATCTTGGTCCTGATTGTCTCTTGGAGAAGGTAGAGGAATTTGAGATTGCTTCACAGGCTTTGGAGCATTCCCATCCAGCATTTAGTTTGTCATTTAAAGAAAATGACTCAGAAGGTTCAGCTGCAAACTTTGAAAATATCTATTCTAGTGACGACTTTTCTGCTGAAGAGGACGATGAAAATGAGGATGAAGAAGATTATGATGACTACCAGGATGAAGACGATGACTCCTATGTAGTGGACACATCAGCTCAACCCGGATCATTAGGTATTGATATGATTGTCAAAAAGCTAAAACAAAGACCATTTGAGTAA 1728 0.4826 MVIVALSSSLPAGRNLFSSLPSTPPPTDRTAAVSATPPPPIPVPKYPPPRKSQNPPQPPTPNPGLKYHRNSKYHKRVPSDGVVVSDAADRSVIIGESGVSYLLPGAPFEFQFSYSETPKAKPIAIREPAFLPFAPPTMPRPWTGKAPLKSKKKKIPLFDSFNPPPPGTKGVKRVEMPGPFPMGQFPKEGKTREEILGEPLKKWEVQMLVQPMISYNRQVNLGRDGLTHNMLELVHSHWKRSRICKIRCLGVPTVDMDNVCHHIEEKTGGKIIHRAGGVVYLFRGRNYNYRTRPQYPVMLWKPATPVYPKLIEDAPGGLTKAEADELRKKGKSLLPICKLAKNGVYTSLVKNVRDAFEGSVLVKVNCKGLDPSDYKKIGAKLKDLVPCVLLSFDDEQILIWRGKDWKSRYHQPVPVFAPSKSGFTGNSESSGEADGNQTEHGDNNVVNTSPKMLSLWKRAIESSKALLLDEFNLGPDCLLEKVEEFEIASQALEHSHPAFSLSFKENDSEGSAANFENIYSSDDFSAEEDDENEDEEDYDDYQDEDDDSYVVDTSAQPGSLGIDMIVKKLKQRPFE* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0640 575 MobiDBLite consensus disorder prediction 515 556 - -
Pvu3g0640 575 SUPERFAMILY YhbY-like 199 292 IPR035920 -
Pvu3g0640 575 MobiDBLite consensus disorder prediction 522 550 - -
Pvu3g0640 575 SUPERFAMILY YhbY-like 318 409 IPR035920 -
Pvu3g0640 575 MobiDBLite consensus disorder prediction 420 447 - -
Pvu3g0640 575 ProSiteProfiles CRM domain profile. 198 294 IPR001890 GO:0003723
Pvu3g0640 575 Pfam CRS1 / YhbY (CRM) domain 202 283 IPR001890 GO:0003723
Pvu3g0640 575 Pfam CRS1 / YhbY (CRM) domain 318 401 IPR001890 GO:0003723
Pvu3g0640 575 PANTHER CRS2-ASSOCIATED FACTOR 2, CHLOROPLASTIC 10 571 - -
Pvu3g0640 575 Gene3D - 318 414 IPR035920 -
Pvu3g0640 575 MobiDBLite consensus disorder prediction 14 30 - -
Pvu3g0640 575 SMART CRS1_YhbY_2 200 283 IPR001890 GO:0003723
Pvu3g0640 575 SMART CRS1_YhbY_2 318 401 IPR001890 GO:0003723
Pvu3g0640 575 ProSiteProfiles CRM domain profile. 316 412 IPR001890 GO:0003723
Pvu3g0640 575 MobiDBLite consensus disorder prediction 31 63 - -
Pvu3g0640 575 Gene3D - 199 295 IPR035920 -
Pvu3g0640 575 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 10 571 IPR044599 GO:0000373
Pvu3g0640 575 MobiDBLite consensus disorder prediction 14 70 - -
Pvu3g0640 575 MobiDBLite consensus disorder prediction 155 187 - -
Pvu3g0640 575 MobiDBLite consensus disorder prediction 419 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0640 Pvu-Chr3 8423077 8434657 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0640 - - gmx:100801953 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0640 3 8423077 8434657 Pvu3g0640 3 8423077 8434657 ECH