Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0630 ATGGCAGCATCTGCAGATAATACCCACGATGTTGTGTCCCTCCTCTCTTCACCCCAAAGGGACTTTCTTCTAAGGAACAACGGCGATCAGGTGAAAATTGAGAGCCTGAAGGGAAAGAAACTTGGTGTTTATTTTTCGGCATCCTGGTGTGGTCCGTGTCGAAAATTCACGCCAACTTTGGTGGAGGCATACAATGAGGTTGTGTCAAAAGGTGACTTTGAGGTCGTTTTTGCCTCGGCTGATGAAGATGAAGAGTCTTTTAAAGGTTACTTTTCCGAGATGCCATGGCTTGCAATCCCATTTTCTGATTCGGAGACACGCAGTCGCCTTGATGAATTGTTTCATGTGAGGGGGATTCCCCATCTCGTGATACTTGAGGAAACTGGCAAAGTTGTGACTGAAGATGGAGTTGATATTGTACGTGAATATGGTGTTGAAGCATACCCCTTTACGTCAGCAAGGATCCAAGAGTTGAGAGCTCAGGAAGAGGAAGCTAGGAGGAACCAGTCCGTGAGATCTCTCTTGATCTCTCCATCTCGTGACTTTGTTATATCATCCGATGGAAACAAAATACTTGTCTCTGAGCTTGAGGGCAAGACAGTTGGTCTGTATTTCTCTCTGAATTCATTCCAACGAAGCAGTGAGTTTACTCCAAAGCTAGTGGATGTTTATGAGAAGCTGAAGGCCAAGGGGGAGAACTTTGAGGTTGTTTTGATACCCTTAGATGAAGATGAAGAATCATTCAAGAAAGTATTAGGAAGTGTCCCTTGGTTATCCTTGCCTTTCAAGGACAAATTCTGCGGGAAGCTGGCTCAGTACTTTGAGCTTTCAACCCTCCCCACTTTGGTTATCATTGGGCCTGATGGGAAAACTCTTAATCCGAATGTTGCTGAGGCTATTGAAGATCATGGGGTTGATGCATACCCATTCACTCCTGAAAAGTTTGTGGAGCTTGATGAAATTTTGAAGGCCAGGGAGGCAGCTCAAACCCTTGAGTCAGTTTTGGTGTCCGAGGATCGTGGTTTTGTCATTGGCAAAGATGGGGTGCAGATTCCTGTGTCAGAATTAAAGGGGAAGGTTGTCCTGCTATACTTCTCAGCCCACTGGTGTCCTCCATGCCGCGCATTCCTTCCAAAACTTGTTGATGCATATCAAGAGATTAAGGAAAAGGGAAATGCATTAGAAGTTGTTTTCATCTCAAGTGACAAAGATCAAGCCTCCTTTGATGAATTCTTTGGAGGAATGCCATGGTTGGCACTTCCCTTTGGCGACTCTAGGAAGAAATTCTTGAGTCGCAAGTTCAAGGTAACTGGCATCCCCAAGCTTGTGGCCATTGGGTCAAGTGGCCAGACTTCGACAACTGAGGCTCGAGATCTGGTTTTGCAATATGGGGCTCGTGCATACCCTTTCACTGAGGAGAAAATACAGGACATAGAGGCAGAAGAAGAAGAGACTGCAAAGGGGTGGCCAGAGAAGGTGACACATGAAACACATGAGCATGAGCTTGTGTTGACACGCCGCAAGGTGTATTACTGTGATGGTTGCAATGAACAGGGTTACGCATGGTCGTATTACTGTGGAGAGTGTGACTTTGATCTGCATCCAAAATGTGTATTGGAGGAGGATAAAGGAAGCAAAGATGATACTGATGTTAAGGAAGAAGACAAGTCCAAAGATGGATGGGTATGTGAGGGAGAAGTCTGCAAAAAAGTCTGA 1716 0.454 MAASADNTHDVVSLLSSPQRDFLLRNNGDQVKIESLKGKKLGVYFSASWCGPCRKFTPTLVEAYNEVVSKGDFEVVFASADEDEESFKGYFSEMPWLAIPFSDSETRSRLDELFHVRGIPHLVILEETGKVVTEDGVDIVREYGVEAYPFTSARIQELRAQEEEARRNQSVRSLLISPSRDFVISSDGNKILVSELEGKTVGLYFSLNSFQRSSEFTPKLVDVYEKLKAKGENFEVVLIPLDEDEESFKKVLGSVPWLSLPFKDKFCGKLAQYFELSTLPTLVIIGPDGKTLNPNVAEAIEDHGVDAYPFTPEKFVELDEILKAREAAQTLESVLVSEDRGFVIGKDGVQIPVSELKGKVVLLYFSAHWCPPCRAFLPKLVDAYQEIKEKGNALEVVFISSDKDQASFDEFFGGMPWLALPFGDSRKKFLSRKFKVTGIPKLVAIGSSGQTSTTEARDLVLQYGARAYPFTEEKIQDIEAEEEETAKGWPEKVTHETHEHELVLTRRKVYYCDGCNEQGYAWSYYCGECDFDLHPKCVLEEDKGSKDDTDVKEEDKSKDGWVCEGEVCKKV* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0630 571 ProSitePatterns Thioredoxin family active site. 362 380 IPR017937 -
Pvu3g0630 571 SUPERFAMILY Thioredoxin-like 344 451 IPR036249 -
Pvu3g0630 571 ProSiteProfiles Thioredoxin domain profile. 322 465 IPR013766 -
Pvu3g0630 571 CDD TryX_like_TryX_NRX 341 470 IPR045870 GO:0004791
Pvu3g0630 571 ProSiteProfiles Thioredoxin domain profile. 13 160 IPR013766 -
Pvu3g0630 571 Gene3D Glutaredoxin 15 152 - -
Pvu3g0630 571 Gene3D Glutaredoxin 334 472 - -
Pvu3g0630 571 Gene3D Glutaredoxin 174 311 - -
Pvu3g0630 571 ProSitePatterns EF-hand calcium-binding domain. 555 567 IPR018247 -
Pvu3g0630 571 Pfam C1 domain 497 538 IPR004146 -
Pvu3g0630 571 SUPERFAMILY Cysteine-rich domain 489 539 IPR046349 -
Pvu3g0630 571 SUPERFAMILY Thioredoxin-like 24 132 IPR036249 -
Pvu3g0630 571 Pfam Thioredoxin-like 198 290 IPR012336 -
Pvu3g0630 571 Pfam Thioredoxin-like 358 450 IPR012336 -
Pvu3g0630 571 Pfam Thioredoxin-like 39 131 IPR012336 -
Pvu3g0630 571 PANTHER NUCLEOREDOXIN 1-2-RELATED 4 539 - -
Pvu3g0630 571 PANTHER THIOREDOXIN 4 539 - -
Pvu3g0630 571 CDD TryX_like_TryX_NRX 21 150 IPR045870 GO:0004791
Pvu3g0630 571 SUPERFAMILY Thioredoxin-like 184 292 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0630 Pvu-Chr3 8253476 8256522 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0630 K17609 - gmx:100809224 953.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0630 3 8253476 8256522 Pvu3g0630 3 8253476 8256522 ECH