LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu3g0623	ATGGCCGGAGAAACATACCAGGAAGCCATTGCAGCGTTGACCAAGCTTATAAGCGAGAAAGCCGACCTCGGTGACGTCGCCGCCGCAAAGATCAAGAAGCTGACGACGGAGCTGACGAGCGACGCGTCGAAGCCGTTTAACCCGGATGAGAGGATCCGAATCGGGTTCGACCACTTCAAGAACGAGAAATTCCAGAAGAATCCGGAATTATATGGGGAACTTGCCAAAGGCCAGAGTCCTAAGTTTCTGGTGTTTGCTTGCTCAGACTCAAGAGTTTGCCCTTCCCATATTCTGGATTTTCAACCGGGTGAAGCGTTTGTGGTCCGAAATATAGCCAACATGGTTCCACCGTATGACAAGACGAAGTATTCAGGAACAGGGGCAGCCATTGAATATGCAGTGCAGCATTTAAAGGTGGAGAATATTGTGGTCATTGGACACAGCTGCTGTGGAGGGATAAAGGGCCTCATGTCCATCCCAGATGATGGGACCACTGCAAGTGAATTCATAGAGAATTGGGTCCAAATTTGTACCCAGGCAAAGTCGAAGGTTAAAACTGAAGCAAGTGCACTAGAATTTTCGGAGCAGTGTACCAACTGCGAGAAGGAAGCTGTAAATGTATCAGTTGGGAACCTTTTGACTTATCCATTTGTGAGAGATTGTGTTGTGAATGAAACACTAGCTTTGAAAGGTGCACATTACAACTTCGTTAAGGGTACCTTTGAGCTGTGGGATCTGGACTTCAAAATCTCCAACTCTGTGTCTGTTTAA	771	0.4708	MAGETYQEAIAALTKLISEKADLGDVAAAKIKKLTTELTSDASKPFNPDERIRIGFDHFKNEKFQKNPELYGELAKGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDKTKYSGTGAAIEYAVQHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASEFIENWVQICTQAKSKVKTEASALEFSEQCTNCEKEAVNVSVGNLLTYPFVRDCVVNETLALKGAHYNFVKGTFELWDLDFKISNSVSV*	257

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu3g0623	256	PANTHER	CARBONIC ANHYDRASE	1	256	-	-
	Pvu3g0623	256	CDD	beta_CA_cladeB	55	244	IPR045066	GO:0004089\|GO:0008270
	Pvu3g0623	256	SMART	Pro_CA_2	75	245	IPR001765	GO:0004089\|GO:0008270
	Pvu3g0623	256	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 1.	87	94	IPR015892	GO:0004089\|GO:0008270\|GO:0015976
	Pvu3g0623	256	Gene3D	Carbonic anhydrase	39	256	IPR036874	GO:0004089\|GO:0008270
	Pvu3g0623	256	PANTHER	CARBONIC ANHYDRASE	1	256	IPR001765	GO:0004089\|GO:0008270
	Pvu3g0623	256	Pfam	Carbonic anhydrase	83	240	IPR001765	GO:0004089\|GO:0008270
	Pvu3g0623	256	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 2.	131	151	IPR015892	GO:0004089\|GO:0008270\|GO:0015976
	Pvu3g0623	256	SUPERFAMILY	beta-carbonic anhydrase, cab	50	251	IPR036874	GO:0004089\|GO:0008270

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu3g0623	Pvu-Chr3	8137061	8142060	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu3g0623	K01673		-	gmx:100808326	459.144

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu2g0738	2	9739735	9750255	Pvu3g0623	3	8137061	8142060	PCT