Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0622 ATGCAAAACATGTCTCTCTGTGCTTCACCCTCCACCACAACTTCACACCTCACTTCCCTTCCTTCTTCACTCCCTTCCACTTCACCACTTTCTCTCAGATTTTCCTTCACTTTCCGGGAAAACAGAACCCCAGTTAGATCACTCAAAGCTCCCTTTTCAGCAAGGCCTGCAAGAGTGTTGGTGAAGGCTCAGGCTACTGCACCTGCTTCTTCTGAGGCTGTGAAACTCACACCTGTGCCTTCTCAGATGAAGGCATGGGTGTATGGGGAATATGGGGGTGTGGATGTTTTGAAGCTGGACTCCAATGTTGCTGTGCCTGATGTGAAAGAGGATCAGGTCCTTGTCAAAGTTGCTGCTGCTGCTCTTAACCCTGTTGATGGCAAGAGAAGGCAGGGAAAGTTTAAGGCCACTGATTCTCCTCTTCCGACTGTTCCGGGCTATGATGTTGCGGGTGTGGTGGTGAAGGTTGGTAGTGAAGTGAAGGACTTTAAAGTGGGTGATGAAGTTTATGGAGATCTAAGTGAGAAAGCATTAGAAGGGCCTAAGCAATTCGGGTCTTTGGCTGAGTATACAGCTGTTGAGGAGAAACTATTGGCACTAAAACCTAAGAATTTGGACTTTGCTCAGGCTGCTGCTCTTCCTCTAGCAATTGAGACTGCTCATGAGGGTTTGGAGAGGACTGCATTTTCTCCTGGTAAATCTATTCTTGTTCTAAATGGTTCTGGAGGAGTTGGAAGCCTAGTCATTCAGCTAGCTAAGCAAGTCTTTGGAGCTTCAAGAGTTGCTGCCACTTCAAGCACTAGAAATTTGGACCTGTTGAAAAGTCTGGGAGCTGATTTGGCTATTGACTACACAAAAGAAAACTTTGAAGATTTGTCAGAAAAATTTGATGTAGTCTTTGATGCCATTGGGCAATGTGACAGGGCAGTGAAGGCTGTGAAAGAAGGTGGCAGTGTGGTGGCACTCACAGGTGCGGTTACCCCACCTGGTTTCAGATTTGTAGTTACTTCCAATGGAGCTGTTCTTAGGAAACTAAACCCTTACTTAGAGAGTGGAAAGGTGAAACCAATTGTAGACCCCAAAGGTCCATTTCCCTTTGACCAGCTTGCTGAAGCCTTCTCCTACCTTGAAACCAATCGAGCCACTGGAAAGGTTGTTATACACCCCATCCCCTGA 1176 0.466 MQNMSLCASPSTTTSHLTSLPSSLPSTSPLSLRFSFTFRENRTPVRSLKAPFSARPARVLVKAQATAPASSEAVKLTPVPSQMKAWVYGEYGGVDVLKLDSNVAVPDVKEDQVLVKVAAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGSEVKDFKVGDEVYGDLSEKALEGPKQFGSLAEYTAVEEKLLALKPKNLDFAQAAALPLAIETAHEGLERTAFSPGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLDLLKSLGADLAIDYTKENFEDLSEKFDVVFDAIGQCDRAVKAVKEGGSVVALTGAVTPPGFRFVVTSNGAVLRKLNPYLESGKVKPIVDPKGPFPFDQLAEAFSYLETNRATGKVVIHPIP* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0622 391 SMART PKS_ER_names_mod 92 387 IPR020843 GO:0016491
Pvu3g0622 391 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 47 391 - -
Pvu3g0622 391 CDD MDR_like_2 83 387 - -
Pvu3g0622 391 SUPERFAMILY GroES-like 80 237 IPR011032 -
Pvu3g0622 391 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 47 391 IPR044626 GO:0016628
Pvu3g0622 391 Pfam Alcohol dehydrogenase GroES-like domain 111 172 IPR013154 -
Pvu3g0622 391 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 232 253 IPR002364 GO:0008270|GO:0016491
Pvu3g0622 391 Gene3D - 224 338 - -
Pvu3g0622 391 MobiDBLite consensus disorder prediction 1 28 - -
Pvu3g0622 391 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 205 328 IPR036291 -
Pvu3g0622 391 Pfam Zinc-binding dehydrogenase 276 387 - -
Pvu3g0622 391 Gene3D - 90 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0622 Pvu-Chr3 8131771 8134526 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0622 K18980 - gmx:100810816 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0622 3 8131771 8134526 Pvu3g0622 3 8131771 8134526 ECH