Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0578 ATGCCTGCCTCTGATCATCGCCGCCTGCGTCACGCGGTGGCGGCATGGATGGTAATAGCGTTGCTTGGCTGCGAAGTGGGAGAAGGTTTGAAGGTGCCGTTTAGAGTGAACGACGTGCTTCCGGTGCTGCCACGCCAGATTTCGTGGCCCGTTCTCAACAACCTCCACAGTGCCGTTGACTTGCTCCCTTATTTCGTTGGCTCCCTCACTCCCTCCAATGCCTCCATTAAGTGGAAAGGGGCTTGCTTCTTTGATAACACCGCCAATATTCAACTCACCCCCGCTTTAGAGGGTGCTGTTATCTACCTCAAGACAGAGGCTGCACATAGCTGGACCTGCATGGATCTATATGTCTTTGCAACCCCCTACAGGATTACGTGGGACTACTACTTCTCTTCGCGGGAACATACCTTGAAGTTTGATTCCTGGGAAGAGCCTGCAGAATTGGAATATGTGAAGCAGCATGGGGTTTCTGTGTTTCTCATGCCATCTGGGATGCTGGGAACAATGCTTTCTCTGATTGATGTTTTGCCTTTGTTCTCAAACACCGGTTGGGGTCAGAATGCCAACCTGGATTTCCTGAAGAAGCACATGGGGGCTACATTTGAGAAACGCAGCCAACCTTGGCGTGCATATATAGATCCTGCGGATGTTCATTCTGGAGATTTCTTAGCGGTGTCAAAGATCCGGGGTAGGTGGGGAGGTTTTGAGACGTTAGAAAAGTGGGTGACTGGTTCATTTGCTGGTCATACTGCAGTTTGCTTGAAGGATGAATTGGGGAATTTATGGGTTGGTGAATCAGGGCATGAGAATGAAAAGGGTGAAGAAATAATAGCGGTAATTCCTTGGGAAGAATGGTGGGAATTGGCTCTTAAAGATAATTCCAATCCACAGATAGCCTTGCTTCCCCTGCATCAGGAAATACGTGCAAAATTTAACAACACTGCAGCATGGGAGTATGCCCGGAGCATGTCTGGCAAGCCATATGGTTATCACAATATGATATTCAGTTGGATTGACACTGTAGCTGACAACTATCCTCCACCTCTCGATGCTCACTTGGTAATTTCTGTCATGTCTATGTGGACTAGATTGCAGCCAGCATATTCTGCTAATATGTGGAATGAAGCATTGAATAAGCGGTTAGGGACTGAGGGTTTGGATTTGCATGATATTATAGTAGAGACTGAGAAGCGTGGGATACCTTTCGATGAACTACTCACTATTCCTGAACAAGATGAATGGGTATACAGTGATGGGAAGTCAACAACTTGTGTTGCATTTATCCTATCAATGTATAAAGAGGCTGGAGTTTTTGGTCCCGTTTCTAGTTCCATTCAAGTAACTGAGTTCACAATTCGTGATGCATACATGCTCAGAATTTTTGAGGACAACCAAACACGCCTACCAAGATGGTGCAACAATGAGAATGACCAGCTTTCATTCTGCCAGATTCTTGGTGAATATAGGATGGAACTGCCTGGCTACAACACCTTGGAACCATATGCCAACATGAATGAGTACTGCCCTTCTCTTCCTCCAATTTATGATAGGCCTTCTCAATGTTAG 1569 0.4627 MPASDHRRLRHAVAAWMVIALLGCEVGEGLKVPFRVNDVLPVLPRQISWPVLNNLHSAVDLLPYFVGSLTPSNASIKWKGACFFDNTANIQLTPALEGAVIYLKTEAAHSWTCMDLYVFATPYRITWDYYFSSREHTLKFDSWEEPAELEYVKQHGVSVFLMPSGMLGTMLSLIDVLPLFSNTGWGQNANLDFLKKHMGATFEKRSQPWRAYIDPADVHSGDFLAVSKIRGRWGGFETLEKWVTGSFAGHTAVCLKDELGNLWVGESGHENEKGEEIIAVIPWEEWWELALKDNSNPQIALLPLHQEIRAKFNNTAAWEYARSMSGKPYGYHNMIFSWIDTVADNYPPPLDAHLVISVMSMWTRLQPAYSANMWNEALNKRLGTEGLDLHDIIVETEKRGIPFDELLTIPEQDEWVYSDGKSTTCVAFILSMYKEAGVFGPVSSSIQVTEFTIRDAYMLRIFEDNQTRLPRWCNNENDQLSFCQILGEYRMELPGYNTLEPYANMNEYCPSLPPIYDRPSQC* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0578 522 PANTHER ZINC FINGER MYND DOMAIN PROTEIN 16 522 - -
Pvu3g0578 522 PANTHER OS01G0793500 PROTEIN 16 522 - -
Pvu3g0578 522 Gene3D endopeptidase domain like (from Nostoc punctiforme) 217 347 - -
Pvu3g0578 522 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0578 Pvu-Chr3 7135784 7140601 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0578 - - gmx:100815535 1004.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0578 3 7135784 7140601 Pvu3g0578 3 7135784 7140601 ECH