Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0575 ATGGACCATCTTAGACTTATTCTCCTACTTTTCCTCTTCCTACCCACCTGCTTCACTTTCACGTTTCAAACTCCTTCAATCAATGAGTTTTCCAACCAAAGTTCGTCTTCTCTGAAGCAGCAGATTAGCGAGCTAGCTAACAGTCCCAGCACGGTGAAATGGATGAAGAGAATAAGGAGGGAAATCCATGAACATCCAGAACTTGCGAATGAGGAGTTCAGGACAAGTGCTCTCATCAGGCGTGAGCTTGACCAGTTGGGTGTTTCCTACAAGTGGCCTGTGGCTGGGACTGGTGTGGTTGCAAAACTTGGTTCTGGGTCTCCTCCTTTTGTTGCTCTCAGAGCAGACATGGATGCTTTGCCAATTCAGGAAAGGGTCGAATGGGATCATAAGAGCAAAGTGGATGGAAAAATGCATGCTTGTGCACACGATGCACATGTTGCCATGCTACTTGGAGCTGCAAAGATACTGCAAGAAATGAAAGACGTGTTACAGACTACTGTTGTTCTAATCTTCCAACCAGCTGAGGAAAGAGGCACAGGGGCAAAAGAAATGGTCCGAGAAAAGGTGCTTGAAGATGTTGGGGCTATTCTTGGGTTGCACTTGGGGTCAGAGTATCAAACGGGTGTTGTTGCATCACGGCCAGGAGAATTTTTAGCTGGATGTGGAGGCTTCAAAGCAAAGATCAGTGGAAAAGGGGGTTTAGCAGGCGTTCCCCAGCATTGTTATGATCCAGTTTTGGCTGCTTCAACATCAGTTATTAGCTTGCAAAACATTGTTTCGAGGGAGGTTGATCCTTTGGATTCTCAGGTGCTTTCTGTGGCCATGATCAATGCAGGGTATGCTCACGACATCATCCCTGATTCAGCTACATTTGGAGGTACTTACAGAGCATTCAGCAAAAAGAGCTTCTATGGACTCAGGAAAAGGATAGAAGAGGTTATCAAAGGGCAGGCAGAAGTACATAGGTGTTTTGCTGAGGTTGAGTTCTTAGGTAATGAACAGCCCACAATCCCTCCAACCACAAATGATGTAAGAATATACCAACTAGCACACCAAGTCTCTAGTAAGATTGTTGGAGAAGATAAAGTAAAATTAGCTCCCCTCTTCACTGGGAGTGAAGATTTTGCATTTTACTTGGAAAAAGTACCTGGCACATTCATTCTTCTGGGTACACGAAATGAGAAGAGTGGATCCATATATCCTGCTCATAGTCCTTACTTTTTCATTGACGAAGATGTGCTTCCTATTGGTGCTGCAATACATGCAGCATTTGCTCTTTCATACCATTCTTATTCAACAAACTCATACTCTTTGTAA 1320 0.4424 MDHLRLILLLFLFLPTCFTFTFQTPSINEFSNQSSSSLKQQISELANSPSTVKWMKRIRREIHEHPELANEEFRTSALIRRELDQLGVSYKWPVAGTGVVAKLGSGSPPFVALRADMDALPIQERVEWDHKSKVDGKMHACAHDAHVAMLLGAAKILQEMKDVLQTTVVLIFQPAEERGTGAKEMVREKVLEDVGAILGLHLGSEYQTGVVASRPGEFLAGCGGFKAKISGKGGLAGVPQHCYDPVLAASTSVISLQNIVSREVDPLDSQVLSVAMINAGYAHDIIPDSATFGGTYRAFSKKSFYGLRKRIEEVIKGQAEVHRCFAEVEFLGNEQPTIPPTTNDVRIYQLAHQVSSKIVGEDKVKLAPLFTGSEDFAFYLEKVPGTFILLGTRNEKSGSIYPAHSPYFFIDEDVLPIGAAIHAAFALSYHSYSTNSYSL* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0575 439 Pfam Peptidase dimerisation domain 221 319 IPR011650 -
Pvu3g0575 439 SUPERFAMILY Bacterial exopeptidase dimerisation domain 220 339 IPR036264 -
Pvu3g0575 439 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 2 11 437 - -
Pvu3g0575 439 CDD M20_IAA_Hyd 55 429 IPR044757 GO:0009850|GO:0016787
Pvu3g0575 439 Pfam Peptidase family M20/M25/M40 112 426 IPR002933 GO:0016787
Pvu3g0575 439 SUPERFAMILY Zn-dependent exopeptidases 51 429 - -
Pvu3g0575 439 Gene3D Zn peptidases 56 423 - -
Pvu3g0575 439 PANTHER PEPTIDASE M20 FAMILY MEMBER 11 437 IPR017439 GO:0016787
Pvu3g0575 439 Gene3D - 220 339 - -
Pvu3g0575 439 PIRSF Amidohydrol_AmhX 39 432 IPR017439 GO:0016787
Pvu3g0575 439 TIGRFAM amidohydrolases: amidohydrolase 56 418 IPR017439 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0575 Pvu-Chr3 7071224 7074182 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0575 K14664 - gmx:100780711 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0575 3 7071224 7074182 Pvu3g0575 3 7071224 7074182 ECH