Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0569 ATGAACTGCTTCTCGCTGCTATCATCGTACACCGCCGCCGCCGTTGGAAGCGCCGCTCGGTTAATCGCCAACCGTTCCCCGCAGCACTGCTCGTTCCCGACGATATCAGAGTTTTGCCAAATTAGGTCTCTCCGTTCAGAACTCGTGTTCACCACTCGCTGCTTTTCCACCAAAAAAGGGCGCAAAAGTGATTCTAGTTCTTCTCGGCTGCACAAGGCCGAACCAGAAGCACCGGTCATGGAGAAGGAGAAGGACGCTTTCTATGTCGTTCGGAAAGGGGACGTTGTTGGAATCTATAATAGTCTCGCCGATTCTCAGGCTCAAGTTGGATCTTCTGTATGCAATCCTCCTGTTAGTGTGTACAAGGGATATTCGTTGTCAAAGGACACTGAGGAATATCTTGCCTCGCATGGGCTGAAGAATGCATTATATACAATTAGAGCTGCTGATTTGAAAGAGGATTTGTTTGGCATGCTTATTCCTTGCCCTTTCCAGGAACCTTCTACCAAAGAAGGCACATCAAATATGGATGTACCTAAAAAGAGATCTTTGAGAGTGCCTGGACAGGATGAGAAAGCAGTATCTGAAGATCCCTTGAGAAAGAAAGTCAAGTTAGAGCATAATGCTGTTGCCGAAGCACCTTCACATTCAACTCGGACTTGTACTCTTGAGTTTGATGGTGCATCAAAAGGAAATCCTGGAAAATCTGGTGCTGGGGCTGTTCTGCGGGCTATTGATGGAAGTTTGATTTGTAGGTTACGTGAAGGTGTGGGTGTAGCAACTAACAATGCTGCTGAATATCGTGCAATGATATTGGGAATGAAATATGCTCTTAAAAAGGGATTTACTGGTATTCGTATCCAAGGTGATTCCAAACTTGTTTGCATGCAGATTGATGGTTCCTGGAAGGTCAAGAATGAGAACTTGTCTACATTATATAAGGTGGCAAAAGAACTGAAGGATAAATTTTCTTCATTCCAGATCAACCATGTTCTAAGGAACTTCAACTCTGATGCTGACGCTCAAGCAAATTTGGCCATCAATCTTGCAGATGGCCAAGTCCAGGAAGAGTTTTTGTAA 1080 0.4472 MNCFSLLSSYTAAAVGSAARLIANRSPQHCSFPTISEFCQIRSLRSELVFTTRCFSTKKGRKSDSSSSRLHKAEPEAPVMEKEKDAFYVVRKGDVVGIYNSLADSQAQVGSSVCNPPVSVYKGYSLSKDTEEYLASHGLKNALYTIRAADLKEDLFGMLIPCPFQEPSTKEGTSNMDVPKKRSLRVPGQDEKAVSEDPLRKKVKLEHNAVAEAPSHSTRTCTLEFDGASKGNPGKSGAGAVLRAIDGSLICRLREGVGVATNNAAEYRAMILGMKYALKKGFTGIRIQGDSKLVCMQIDGSWKVKNENLSTLYKVAKELKDKFSSFQINHVLRNFNSDADAQANLAINLADGQVQEEFL* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0569 359 PANTHER PUTATIVE-RELATED 97 355 - -
Pvu3g0569 359 Gene3D - 220 352 IPR036397 GO:0003676
Pvu3g0569 359 MobiDBLite consensus disorder prediction 175 198 - -
Pvu3g0569 359 Gene3D - 84 136 IPR037056 -
Pvu3g0569 359 CDD RNase_HI_like 221 347 - -
Pvu3g0569 359 ProSiteProfiles RNase H type-1 domain profile. 217 348 IPR002156 GO:0003676|GO:0004523
Pvu3g0569 359 SUPERFAMILY Ribonuclease H-like 220 344 IPR012337 -
Pvu3g0569 359 MobiDBLite consensus disorder prediction 58 77 - -
Pvu3g0569 359 MobiDBLite consensus disorder prediction 167 198 - -
Pvu3g0569 359 Pfam Reverse transcriptase-like 225 345 IPR002156 GO:0003676|GO:0004523
Pvu3g0569 359 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 97 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0569 Pvu-Chr3 7010040 7017137 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0569 - - gmx:100779114 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0569 3 7010040 7017137 Pvu3g0569 3 7010040 7017137 ECH